Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_029091.1
Length=168771
Score E
Sequences producing significant alignments: (Bits) Value
seq236 183 3e-41
seq637 131 2e-25
>seq236
Length=545527
Score = 183 bits (202), Expect = 3e-41
Identities = 150/181 (83%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180
|||| || || ||||| ||||| ||||| || ||||| || || || ||| |||| |
Sbjct 30720 GTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCGGTTGAGCACC 30779
Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240
|||||||||| |||||||||||||| || || ||||||||||| || ||||| |||||||
Sbjct 30780 CAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGCTTCAACTCTC 30839
Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAGAGTCTATAATGGC 123300
|||| || ||||||||||||||||||||||| || ||||||||||| || || ||| |||
Sbjct 30840 TGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGCCTGTAA-GGC 30898
Query 123301 T 123301
|
Sbjct 30899 T 30899
>seq637
Length=122170
Score = 131 bits (144), Expect = 2e-25
Identities = 129/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180
|||| || |||||||| ||||| || ||||||| || ||||| | | ||||
Sbjct 107281 GTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATGGAACATC 107222
Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240
| || |||||||| ||||||||||||||||||||||| || ||||| || |||||||| |
Sbjct 107221 CTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTTAACTCCC 107162
Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAG 123287
||||| |||||||||| ||||||||| | || || || ||| ||
Sbjct 107161 TGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAG 107115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539927091863440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |