Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq197 178 3e-39
seq1030 152 1e-31
seq49 86.0 1e-11
>seq197
Length=620651
Score = 178 bits (196), Expect = 3e-39
Identities = 173/223 (78%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || | || || | |||||| |||||||| ||||||||||| || || | | |||
Sbjct 446255 ACGGAGACGTAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 446314
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| |||||||| || || |||||||| || || || ||||| || |||| ||
Sbjct 446315 GCGACCATCCTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACC 446374
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||||||||| || |||||| || ||
Sbjct 446375 CTCCTTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAG 446434
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|||||| ||||||||||| |||||||| || || | |||||||
Sbjct 446435 AGTGATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCATT 446477
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||||||||||||||| || || ||||| || || | ||||| | ||||||
Sbjct 447893 AGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCT 447952
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || |||||||| || || || ||||| || || | || |||||||||
Sbjct 447953 TCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 448012
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| || |||||| || |||||||| |||
Sbjct 448013 TGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCTTCAACTTCCAGAGTGATGGTC 448072
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|||||||| |||||||| || || | |||||||
Sbjct 448073 TTTCCCGTCAGAGTCTTCACGAAAATCTGCATT 448105
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||||||||||||||| || ||||| || || | ||||| | ||||||
Sbjct 446949 AGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCT 447008
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || |||||||| || || || ||||| ||||| | || |||||||||
Sbjct 447009 TCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 447068
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || || ||||| || || | || ||||| |||||||| ||
Sbjct 447069 TGGATCTTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCGACCTCAAGAGTGATAGTT 447128
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 447129 TTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| |||||||| ||||| ||||| || | | || | || ||||| || ||
Sbjct 446729 GTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGACAATGTACGGCCGTCTTCTAGTTG 446788
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||||||||| || || ||||| ||||| | ||||||||||| ||||||||
Sbjct 446789 TTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGGATCTT 446848
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||||| || ||||||||||| || |||||| || |||||||| ||||| || ||
Sbjct 446849 GGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATTGTCTTGCCAGT 446908
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | ||||||
Sbjct 446909 TAGGGTTTTCACGAAAATCTGCAT 446932
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||| || || || ||||| || || ||||| || || | | ||| | ||||| |||
Sbjct 447668 ACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCC 447727
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
||||| || || |||||||| || || |||||||| ||||| | || |||||||| |||
Sbjct 447728 AGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGG 447787
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||||| || ||||||||||| || |||||| || || ||||| ||||||
Sbjct 447788 ATCTTGGCCTTCACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGGGTGATGGTCTTT 447847
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || || | ||||||
Sbjct 447848 CCTGTCAGAGTTTTGACGAAAATCTGCAT 447876
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| |||| || ||||| ||||| || ||||| || |||||||| || || | | |||
Sbjct 446484 CGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTG 446543
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| |||||||| || |||||||| || || || ||||| ||||||| |||
Sbjct 446544 CGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCT 446603
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| |||||||| || || || ||||||||||| || ||| || || ||
Sbjct 446604 TCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCTAGG 446663
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || || || | ||||||
Sbjct 446664 GTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| |||| || ||||| ||||| || ||||| || |||||||| || || | | |||
Sbjct 448112 CGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGATAAGGTG 448171
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| |||||||| || |||||||| || || || ||||| ||||||| |||
Sbjct 448172 CGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCT 448231
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| |||||||| || || || ||||||||||| || ||| || || ||
Sbjct 448232 TCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCTTCGACTTCCAGG 448291
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || || || | ||||||
Sbjct 448292 GTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||| || || || ||||| || || ||||| || || | | ||| | ||||| ||
Sbjct 448381 ACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGACCATCCTCT 448440
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
||||| ||||| |||||||| | | || ||||| || |||| ||| || ||||| |||
Sbjct 448441 AGCTGGTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGG 448500
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||| || || || ||| |||| || |||||| || |||||||| ||||||
Sbjct 448501 ATCTTGGCTTTGACATTCTCAATGATGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTT 448560
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| | ||||||
Sbjct 448561 CCCGTCAGAGTCTTGACAAAGATCTGCAT 448589
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
||||| || || || || ||||| |||||||| || || | | ||| | || |||||
Sbjct 447180 ACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCA 447239
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||||||||| ||||| | | || ||||| || |||| ||| || ||||| |||
Sbjct 447240 AGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGG 447299
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| ||| || || ||||||||||| || |||||| || |||||||| |||||
Sbjct 447300 ATCTTGGCTTTGACATTCTCGATGGTGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTG 447359
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || || | ||||||
Sbjct 447360 CCAGTCAGGGTTTTCACGAAAATCTGCAT 447388
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || |||||||| ||||| ||||| || | | || | || ||||| || ||
Sbjct 448886 GTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTCTTCTAGTTG 448945
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||||||||| || || ||||| ||||| | ||||||||||| ||||||||
Sbjct 448946 TTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCTTGGATCTT 449005
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||||| || ||||||||||| || ||| || || |||||||| ||||| || ||
Sbjct 449006 GGCCTTCACATTCTCGATGGTGTCTGAAGCTTCCACTTCCAGAGTGATTGTCTTGCCAGT 449065
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | ||||||
Sbjct 449066 TAGGGTTTTCACGAAAATCTGCAT 449089
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||||||||||| |||||||| || || | | ||| | || |||
Sbjct 449581 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCT 449640
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || || || ||||| || || | || || ||||||
Sbjct 449641 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCTTTGTCC 449700
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| | || ||||| | |||||| ||
Sbjct 449701 TGGATCTTCGCCTTAACGTTCTCGATGGTGTCTGCAGGCTCGACCTCCAAAGTGATGGTT 449760
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || ||||| || || | |||||| ||
Sbjct 449761 TTCCCAGTCAGGGTCTTCACGAATATCTGCATGTT 449795
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||||||||||| |||||||| || || | ||||| | |||||
Sbjct 449353 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 449412
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| |||||||| ||||| | | || ||||| || |||| ||| || |||||
Sbjct 449413 TCCAACTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCT 449472
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || || ||||| ||| ||| || || || || || |||
Sbjct 449473 TGGATCTTGGCCTTCACATTCTCAATTGTGTCTGAGGCTTCCACTTCCAGGGTAATTGTC 449532
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || || || | ||||||
Sbjct 449533 TTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 449564
Score = 116 bits (128), Expect = 9e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|||||||| || || |||||||| ||||| | || |||||||| |||||||| |||
Sbjct 448725 GCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTG 448784
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || || |||||||| || |||||| || |||||||| ||||||||||| |||||
Sbjct 448785 ACATTCTCAATGGTGTCTGAAGCTTCAACTTCCAGAGTGATGGTCTTTCCCGTCAGAGTT 448844
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | ||||||
Sbjct 448845 TTCACGAAAATCTGCAT 448861
Score = 91.5 bits (100), Expect = 3e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || |||||||| ||||| ||||| || | | || | || ||||| || ||
Sbjct 447413 GTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGGCCGTCTTCTAGTTG 447472
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||||||||| || || ||||| ||||| | || |||||||| ||||||||
Sbjct 447473 TTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTT 447532
>seq1030
Length=27445
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || || || || |||||||| || || | ||||| | ||||| ||||||||
Sbjct 2697 GTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCCAGCTG 2756
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || |||||||| || || || ||||| || || | || |||||||||||||||||
Sbjct 2757 TTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 2816
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || |||||||||||||| || || ||||| || ||||| ||||| |||||
Sbjct 2817 GGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACCTCAAGGGTGATGGTCTTGCCCGT 2876
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || || | |||||| ||
Sbjct 2877 AAGGGTCTTCACGAAGATCTGCATATT 2903
>seq49
Length=1360277
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || || || || || | ||| ||||||||||||||||| ||| || || |||||
Sbjct 903035 CGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTGACATTCTCGATA 903094
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| || ||| ||| ||||| || ||||| ||||| ||||| || || || || || | |
Sbjct 903095 GTATCCGAGGGTTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTGACGAAGATC 903154
Query 211110 TGCAT 211114
|||||
Sbjct 903155 TGCAT 903159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159125356166810
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