Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq197 129 4e-25
>seq197
Length=620651
Score = 129 bits (142), Expect = 4e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || || |||||||| || |||||||| |||||||| | |
Sbjct 446477 AATGCAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTC 446418
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || | |||| || || ||||| || ||| | || ||||| ||
Sbjct 446417 GGACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 446358
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || ||||| ||||| ||||| || | ||||| || ||| |||||
Sbjct 446357 GCAGCGTCTCATCTTCGCCGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAA 446298
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
||| ||||| |||||||| | || || || |||
Sbjct 446297 CATCCAAAAGGAGTCCACCCTTCACTTGGTATTA 446264
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || |||||||| |||||||| | |
Sbjct 447388 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACTCTGGAAGTTGAAGCTTCA 447329
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | ||| | || || |||||||| || | || ||||| ||
Sbjct 447328 GACACCATCGAGAATGTCAAAGC-CAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCA 447270
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| ||||| || || ||||||| ||||| || ||| |||||
Sbjct 447269 GCAGAGGTTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAA 447210
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || ||||| || || | ||| | ||||| | ||||||||||
Sbjct 447209 CATCCAGAAAGAATCTACCCTCCATCTTGTTTTGCGTCTGCGAGGAGG 447162
Score = 118 bits (130), Expect = 7e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || || |||||||| || |||||||| |||||||| | |
Sbjct 448105 AATGCAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTC 448046
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || | |||| || || ||||| || ||| | || ||||| ||
Sbjct 448045 GGACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 447986
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || || || ||||| ||||| | ||||| || ||| |||||
Sbjct 447985 GCAGCGTCTGATCTTCGCTGGTAAGCAACTAGAAGATGGCCGCACCCTATCCGACTACAA 447926
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 447925 CATTCAGAAGGAGTCCAC 447908
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || ||||| || ||||| || | |
Sbjct 446704 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTAGAAGTCGAAGCTTCA 446645
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | |||| || || ||||| ||||| | || || || ||
Sbjct 446644 GACACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAG 446585
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || || || || ||||||| ||||| ||| || ||||||
Sbjct 446584 CAGCGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAAC 446525
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| || || ||||| || | ||| | |||||| | | |||||||||
Sbjct 446524 ATCCAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGAGGAGGA 446477
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || ||||| || ||||| || | |
Sbjct 448332 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAAGTCGAAGCTTCA 448273
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | |||| || || ||||| ||||| | || || || ||
Sbjct 448272 GACACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAG 448213
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || || || || ||||||| ||||| ||| || ||||||
Sbjct 448212 CAGCGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAAC 448153
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| || || ||||| || | ||| | |||||| | | |||||||||
Sbjct 448152 ATCCAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGAGGAGGA 448105
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||| || || ||||| || ||||| || |||||||| | |
Sbjct 447876 ATGCAGATTTTCGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTCA 447817
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 447816 GACACCATCGAGAATGTGAAGGC-CAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCA 447758
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || || || || ||||| ||||| || | ||||| || ||| |||||
Sbjct 447757 ACAGCGTCTCATCTTCGCTGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAA 447698
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || ||||| || | ||| | ||||| | |||| |||||
Sbjct 447697 CATTCAGAAGGAGTCTACCCTCCATCTTGTTTTGCGTCTGCGCGGAGG 447650
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| || ||||| || || ||||| |||||| | || || || |
Sbjct 449795 AACATGCAGATATTCGTGAAGACCCTGACTGGGAAAACCATCACTTTGGAGGTCGAGCCT 449736
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || || |||| | || | | |||||||| || | ||||| ||
Sbjct 449735 GCAGACACCATCGAGAACGTTAAGGCGAAGA-TCCAGGACAAAGAGGGCATCCCGCCCGA 449677
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| |||||| | || || || ||||| || || ||||||| ||||| || ||| ||
Sbjct 449676 CCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTA 449617
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || |||||||||||
Sbjct 449616 CAACATCCAGAAAGAGTCCAC 449596
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || || || || ||||| || || |
Sbjct 449564 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCA 449505
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | |||||||| || | || ||||| ||
Sbjct 449504 GACACAATTGAGAATGTGAAGGCCAAGA-TCCAAGACAAAGAGGGAATTCCCCCAGACCA 449446
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| |||||||| |||| || | ||||| | || |||||
Sbjct 449445 GCAGAGGTTGATCTTTGCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAA 449386
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 449385 CATCCAGAAAGAGTCCAC 449368
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || |||||||| |||||||| | |
Sbjct 446932 ATGCAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTTGAAGCTTCA 446873
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| ||||| | || || || ||
Sbjct 446872 GACACCATCGAGAATGTGAAGGC-CAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCA 446814
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || ||||| |||||||| ||||||| || || || || || ||
Sbjct 446813 GCAGCGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCAGACTATAA 446754
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 446753 TATCCAGAAAGAGTCGAC 446736
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || || || ||||| |||||||| || || || | |
Sbjct 447160 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATCACTCTTGAGGTCGAGCCAGCC 447101
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| | || ||| ||||| | || | | ||||| || || | || ||||| ||
Sbjct 447100 GATACTATCGAGAATGTTAAAGCTAAGA-TCCAGGACAAGGAGGGCATCCCTCCAGACCA 447042
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || || || || ||||||| | ||||| | || |||||
Sbjct 447041 GCAGCGTCTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAA 446982
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 446981 CATTCAGAAAGAGTCCAC 446964
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || |||||||| ||||| || | |
Sbjct 449089 ATGCAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTGGAAGCTTCA 449030
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| ||||| | || || || ||
Sbjct 449029 GACACCATCGAGAATGTGAAGGC-CAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCA 448971
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || ||||| |||||||| ||||||| || || || || || ||
Sbjct 448970 GCAGCGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCTGACTATAA 448911
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 448910 TATCCAGAAAGAGTCAAC 448893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338002209631352
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