Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq65 116 3e-21
>seq65
Length=1244346
Score = 116 bits (128), Expect = 3e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877
|| |||||||| || |||| |||||||||||||||| ||| || || || || ||
Sbjct 630988 ATGTAAGTGTCAATAAGTAATGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGG 630929
Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937
|||||||| |||||||||||||| || ||||| ||||| | | || ||||| || | |
Sbjct 630928 AATCCGTAGAAGCATCTAGCTTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGG 630869
Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984
|| || || || || || ||| || ||||| || ||||| |||||
Sbjct 630868 TTCTCATTAACAATCCCATCAGAAGCAGCAAAGAATGCCAAGACATG 630822
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCA 5105
|||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||
Sbjct 630528 TCAACTTCTTCAACGGTCCAGAAAGAAGCTTCCGCCTTTTTGTACATTTGCCAAATATCT 630469
Query 5106 GGATACTGAATCGGAAGTATGACAAA 5131
||||||||||| | || |||||
Sbjct 630468 TTGTACTGAATCGGGAAGATCACAAA 630443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427040262827402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |