Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq65 116 3e-21 >seq65 Length=1244346 Score = 116 bits (128), Expect = 3e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || |||||||| || |||| |||||||||||||||| ||| || || || || || Sbjct 630988 ATGTAAGTGTCAATAAGTAATGAGTACATTTCAGAATGTACATTCTCCATGGCGATTTGG 630929 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 |||||||| |||||||||||||| || ||||| ||||| | | || ||||| || | | Sbjct 630928 AATCCGTAGAAGCATCTAGCTTCAGTCACTTGCACTTCCTGGGAGAACCTTTCCACAAGG 630869 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATG 4984 || || || || || || ||| || ||||| || ||||| ||||| Sbjct 630868 TTCTCATTAACAATCCCATCAGAAGCAGCAAAGAATGCCAAGACATG 630822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCA 5105 |||||||||||||| ||||| || || |||||||| ||||||||||| ||||||||| Sbjct 630528 TCAACTTCTTCAACGGTCCAGAAAGAAGCTTCCGCCTTTTTGTACATTTGCCAAATATCT 630469 Query 5106 GGATACTGAATCGGAAGTATGACAAA 5131 ||||||||||| | || ||||| Sbjct 630468 TTGTACTGAATCGGGAAGATCACAAA 630443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427040262827402