Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq813 120 1e-22 >seq813 Length=55966 Score = 120 bits (132), Expect = 1e-22 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 |||||| ||||| || ||||| | |||||||| | |||||| ||||||||||||| || Sbjct 22833 GTGATAAACCTCATCACGGTAGATAAACATGATTAAGTCGGCATCCTGCTCGATCGAGCC 22892 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGT 34162 ||| || |||||||| || | | ||| || ||| ||||| || || ||||| ||||||| Sbjct 22893 GGATTCACGCAGGTCGGAGTTGACCGGACGTTTG-TCGGCACGTTGTTCCAGAGAGCGGT 22951 Query 34163 TGAGCTGCGACAGCACGATCACGGG 34187 | |||||||||||| | | ||| || Sbjct 22952 TAAGCTGCGACAGCGCCACCACCGG 22976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160460581515060