Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq1039 452 2e-122
>seq1039
Length=27060
Score = 452 bits (500), Expect = 2e-122
Identities = 674/948 (71%), Gaps = 10/948 (1%)
Strand=Plus/Minus
Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280
||| | |||||||||||| || |||||| || |||||| | || || |||
Sbjct 13189 GCCGTTAACTGGAACAAGATCCAGGACGAGAAAGATCTGGAAGTGTGGAACCGCCTGACC 13130
Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340
||||||||||| |||| || ||||| ||| | |||||||| || || ||||| | |||
Sbjct 13129 AGCAACTTCTGGCTGCCGGAAAAGGTCCCGCTCTCCAACGATATTCCGGCCTGGCAAACC 13070
Query 78341 CTTACGCCGGAA-GAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGA 78399
|| | ||| | ||| || | || || || || || || |||||||| || ||||| ||
Sbjct 13069 CTGA-GCCACACCGAGCAGCAGCTAACGATCCGCGTCTTTACCGGCCTGACGCTGCTGGA 13011
Query 78400 CACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGA 78459
|||||| ||| || |||||||| | || || | ||||| || ||||||||
Sbjct 13010 CACCATTCAGAATACCGTTGGCGCACCGGCTCTGATGGGTGACGCGCTGACGCCGCACGA 12951
Query 78460 GGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTC 78519
||||||||| | | |||||| || |||||| |||| |||||| |||||||||||
Sbjct 12950 AGAGGCGGTGATGTCGAACATCAGCTTTATGGAGGCGGTGCACGCCCGCTCCTACAGCTC 12891
Query 78520 GATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGA 78579
||| ||||| ||||| ||| |||| | | |||| ||| | | ||| || |
Sbjct 12890 GATTTTCTCCACGCTGTGCCAGACCAAAGACGTGGACGCGGCCTACGCCTGGAGCGAAGC 12831
Query 78580 GAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCC 78639
|| ||||| | || | ||||| || | || ||| || || || | |||||| ||
Sbjct 12830 GAGCGAGTCGTTACAAAGAAAGGCGGAGCTGGTGCTGACGTATTATCGGGCCGACGAGCC 12771
Query 78640 CTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTA 78699
||||| |||| | ||||| | | ||||| ||||||||||| || |||||||
Sbjct 12770 GCTGAAGAAGAAGATCGCCAGCGTGTTTCTGGAATCATTCCTCTTCTATTCTGGCTTCTG 12711
Query 78700 CCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTT 78759
||||| ||||||||||| ||||||| |||||| || |||||||| || |||| || |
Sbjct 12710 GCTGCCCATGTACTGGTCAAGCCGCGGCAAGCTCACCAACACCGCCGATTTGATTCGCCT 12651
Query 78760 GATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCT 78819
|| ||||| || ||||| || || ||||| |||||||| || || || ||| ||| ||
Sbjct 12650 CATCATCCGGGATGAAGCGGTGCACGGGTATTACATCGGCTATAAATATCAGAAAGGGCT 12591
Query 78820 CGAGA--CCCAGGGGC-CGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCT 78876
|| | ||| | | ||| ||| || ||||| || | || || ||||| ||||
Sbjct 12590 GGAAAAGGTCAGCGACGCGGAGCGCGAG---GAGCTTAAAGGGTTTGCGCTCGATTTGCT 12534
Query 78877 CTCGGAGCTCTACGACAACGAG-TGTGACTACACCGAGCAGCTCTATGACGACGTCGGAC 78935
||| || |||||||||||| || | ||| |||||| | || || | || | |||
Sbjct 12533 GATGGATCTGTACGACAACGAGCTGAG-CTATACCGAGGAACTGTACGCCGGCACCGGCT 12475
Query 78936 TCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCG 78995
||||| || || ||||| ||||||||| |||||||||||||||||| ||||
Sbjct 12474 GGGAGGAGGACGTGAAAGCCTTCCTCTGCTACAACGCCAACAAGGCGCTGATGAATCTCG 12415
Query 78996 GCTACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAGACCCGGCCATCATGTCCGCGC 79055
||||||| || |||||||| |||| | | || ||||||| || | |||||||
Sbjct 12414 GCTACGACGCGCTGTTCCCGCCGGAACTGGCGGAGGTTAACCCGGCGATTCTCTCCGCGC 12355
Query 79056 TCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCA 79115
| || || || |||||| |||||||| ||||||||||||||||| ||| ||||| |
Sbjct 12354 TGTCGCCCAACGCCGACGAAAACCACGATTTCTTCTCCGGGTCGGGTTCGTCGTACGTGA 12295
Query 79116 TCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGATGAA 79163
| |||||||| | | || | |||||||||||||| || | |||||
Sbjct 12294 TGGGCAAAGCGGTGGAAACCGAGGATGAGGACTGGGATTTTTAATGAA 12247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299315055520292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |