Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq960 118 3e-22 >seq960 Length=33163 Score = 118 bits (130), Expect = 3e-22 Identities = 210/301 (70%), Gaps = 14/301 (5%) Strand=Plus/Plus Query 31653 GGCAATGGCGACGAGGCATCGGGCGACGGCTGGCGGTACCGCGGGCGCGGGCTGCTGCAG 31712 |||||| | |||||| ||||||||| ||| || |||||||| |||||| | ||| Sbjct 32863 GGCAATACCCCCGAGGCCGATGGCGACGGCCAGCGCTATCGCGGGCGTGGGCTGATCCAG 32922 Query 31713 ATCACCGGCCGGGCGAACTACCGCGCCGCCGGCGACGGGCTG---GGCCA-----GCC-G 31763 ||||||| || ||||| ||| | || ||| ||| ||| | ||| | Sbjct 32923 GTCACCGGGCGCAGCAACTATCGCCAGTGCAGCCTCGGTCTGTTCGGCGACGAGCGCCTG 32982 Query 31764 CTGGAGCAGGAACCCGAGCTTCTCGAGCAACCGGAGTGGGCGGCGATCTCGGCGGCCTGG 31823 |||||| | || ||||| || ||||| || | ||||| || || || |||||| Sbjct 32983 CTGGAGTTG---CCTGAGCTGCTGGAGCAGGCGCAATGGGCTGCCGAATCCGCAGCCTGG 33039 Query 31824 TGGTGGGC-CAGTCACGGCTTGAACGACCTGGCCGACCGCGGCGAGTTCGCCGCCATCAC 31882 | |||| | | | |||| |||| ||||||||| || | ||||||| ||||||||| Sbjct 33040 TTCTGGGAGCGGGCGGGGCTC-AACGCCCTGGCCGATCGTGACGAGTTCAACGCCATCAC 33098 Query 31883 TCGGCGCATCAACGGCGGCACGAACGGCCAGGCGGAGCGCCTGGCGCTGTGGGAGCGGGC 31942 ||||||||||| |||||| |||||||| || || |||| ||| |||| ||||| Sbjct 33099 CCGGCGCATCAATGGCGGCCTGAACGGCCTGGAAGATCGCCGCCAGCTCTGGGGCCGGGC 33158 Query 31943 G 31943 | Sbjct 33159 G 33159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156780659912860