Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq754 208 1e-48
>seq754
Length=71200
Score = 208 bits (230), Expect = 1e-48
Identities = 236/314 (75%), Gaps = 2/314 (1%)
Strand=Plus/Plus
Query 99138 GAGCAATCATGGAACAGTATCAAGATTTAATGACTCGCGTAATGAGCGAAGGCGTGCCGA 99197
||| || |||| ||||||||| || || |||| || | || ||| |||||
Sbjct 66008 GAGGAACCATGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGGCACGCCGA 66067
Query 99198 AGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATC 99257
| || |||||||| || |||||||| || || ||||| || ||||||||||| ||||||
Sbjct 66068 AAAACGACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATT 66127
Query 99258 TGCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACG 99317
| || |||||||| || ||||| |||||||||||||| || |||| ||||| ||||| |
Sbjct 66128 TACAGGAAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATG 66187
Query 99318 AACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAA 99377
||||||| ||||||||| ||||||||||||| || ||| | | || || ||
Sbjct 66188 AACTGCTCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCT 66247
Query 99378 CTATTTGGGACGAAT-GGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAG 99436
| || |||||||||| || ||| ||| | ||| |||| || ||||| ||||| || |||
Sbjct 66248 CCATCTGGGACGAATGGGCAGATGAAA-ACGGCAACCTGGGCCCGGTTTACGGCAAGCAG 66306
Query 99437 TGGCGGTCTTGGCC 99450
||||| | |||||
Sbjct 66307 TGGCGCGCATGGCC 66320
Score = 149 bits (164), Expect = 9e-31
Identities = 232/332 (70%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 99843 CTGACCGTCAGTTATCGTGTCAGCTTTATCAACGCAGCGCCGATGTGTTCTTAGGGGTGC 99902
||||| | || | || || ||||| || || || | ||||||||| | || |||
Sbjct 66479 CTGACGGAAAGCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCTGC 66538
Query 99903 CGTTTAATATTGCGTCATACGCTTTGTTGATCCACATGTTTGCACAGCAGGCTAACATGA 99962
||||||| ||||| || || |||| |||| ||| | || |||||| | || ||
Sbjct 66539 CGTTTAACATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGG 66598
Query 99963 CCGTGGGTGATTTCGTCTGGTCTGGTGGTGACGTACATCTGTACAATAACCATCTGGAAC 100022
||||| ||||| |||||| | ||||| ||| ||||| |||| |||||| |||| |
Sbjct 66599 AAGTGGGGGATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGC 66658
Query 100023 AAACCCGTACCCAGTTAGGTCGTGCCCCGCGTCCGTTACCTAAGCTGATTATCAAACGTA 100082
| |||| | |||| | || | ||||| || | || ||||| || ||||| || |
Sbjct 66659 AGACCCATCTCCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCA 66718
Query 100083 AGCCAGACTCCATCTTCGAATATAAGTTTGAAGACTTCGAACTTGAAGGCTACGACCCGC 100142
| || | || ||||| || || || || || || || |||| |||||||||||||
Sbjct 66719 AACCGGCGTCAATCTTTGACTACCGCTTCGATGATTTTGAGATTGAGGGCTACGACCCGC 66778
Query 100143 ATCCTGCAATCAAAGCACCGGTCGCGATATGA 100174
| |||| |||||||| || ||||| || |||
Sbjct 66779 ACCCTGGCATCAAAGCGCCCGTCGCTATCTGA 66810
Score = 105 bits (116), Expect = 1e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 99569 CAGATCGACCAAATCTCCAAGGCCATGGACCAGTTGAAAAACGACCCGGATAACCGTCGT 99628
|| || ||||| ||| ||| | ||| ||||| |||||||||| || || || ||
Sbjct 66337 CATATTGACCAGATCACCACCGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGA 66396
Query 99629 ATCATCGTGTCGGCATGGAACGTAGCTGACCTCGACGAAATGGCTTTAGCACCGTGCCAC 99688
||||| || || || |||||||| | || || ||| ||||||| | ||||||||||||
Sbjct 66397 ATCATTGTTTCCGCCTGGAACGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCAC 66456
Query 99689 GCATTCTTCCAGTTCTAC 99706
|| |||||||||||||||
Sbjct 66457 GCGTTCTTCCAGTTCTAC 66474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716447933294800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |