Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031017.1
Length=32409
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 425 1e-114
>seq1367
Length=8089
Score = 425 bits (470), Expect = 1e-114
Identities = 406/520 (78%), Gaps = 0/520 (0%)
Strand=Plus/Plus
Query 28673 AATGAGTTTAGATAATTTCAAAAAGCAAACTATTACATGGGATATGATTAACCAGGCATT 28732
|||||||||||||||||| ||||| | | ||| |||||||| | | || | | ||
Sbjct 6065 AATGAGTTTAGATAATTTTAAAAATAGAGCGATTGTATGGGATACGGTCAATAAAGGCTT 6124
Query 28733 TGAACAGCCCATTCAAATTATGGAGGGAGATGTCAATGCAAGAACGATACTTCTTAAGAT 28792
||| || |||||||| ||| | || || ||||| || ||||| | |||| ||
Sbjct 6125 CCCACAACCAATTCAAATAATGCAAGGCGACGTCAACGCTAGAACATTGTCAATTAAAAT 6184
Query 28793 AACTGATAATGGTTCTGTACTTGACTTAACAGGTTATTCAGTAAAATTAACCTATCAATA 28852
| ||||||||| | | |||| || || ||| ||||| ||||| | || ||||||||
Sbjct 6185 ACTTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATA 6244
Query 28853 TATGTATAAATCTCAATCAGGTTTTATTATGTTAACTCCTAATGATATATCCAAGGGAGA 28912
|| ||| | | ||||||||| ||||| | ||||| | | || | ||||||||
Sbjct 6245 TACTAATAGCAGTAATTCAGGTTTTGTTATGATTCCTCCTGAAAACTTAACTAAGGGAGA 6304
Query 28913 ATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCAAATTTAAT 28972
|| | | |||||||||| || ||||||| | | ||| | || || | || |||||
Sbjct 6305 GTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCGAACTTAAT 6364
Query 28973 ACTCCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGA 29032
||| ||||||||||||||||| || ||||| ||||| ||||| | || |||||||||||
Sbjct 6365 ACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTTATATCAGA 6424
Query 29033 TGATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 29092
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6425 TAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAA 6484
Query 29093 ATTATTATTGGGGAAAATGCCACAAGTGTTGCGTAGTGAGTTGAATGACTTACACGCTCA 29152
||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 6485 ATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTACATGCTCA 6544
Query 29153 AACTGAATCAAATACAAGCAACATCGAGCTTAAAGCAAAT 29192
|||||||||||| | ||||| || ||||||||||| |||
Sbjct 6545 AACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAAT 6584
Score = 145 bits (160), Expect = 2e-30
Identities = 97/108 (90%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 29565 TTAATCACAAATCAAAATGTGACAACTGCTCAAACAACAGCAAATCAAGCTAAAACTGAT 29624
|||||||||||||||||||| |||||||||||| ||||||||| |||||| ||| |||
Sbjct 6666 TTAATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 6725
Query 29625 GCCCAAGCTGCAATGACAAAGGCTACCGAAGCACAAGCGAACAGTTTA 29672
||| || ||||||| ||||||||||||||||||||||||||||||||
Sbjct 6726 GCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTA 6773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 103584993204188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |