Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031019.1
Length=41809
Score E
Sequences producing significant alignments: (Bits) Value
seq986 820 0.0
seq997 156 1e-33
seq1102 98.7 3e-16
>seq986
Length=30461
Score = 820 bits (908), Expect = 0.0
Identities = 982/1331 (74%), Gaps = 2/1331 (0%)
Strand=Plus/Plus
Query 29095 TTACGCTTTAATATGTATTTAGGCCGCTGTTTGGTTTCTATGTAAATTCTACCAATATAT 29154
|||| |||||| | ||| |||||| ||| |||| || ||||| || ||||| ||
Sbjct 11744 TTACCCTTTAACAGGTAGCGAGGCCGTCCCTTGCTTTCGATATAAATCCTTCCAATGTAC 11803
Query 29155 TCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCAGGAAAAGAACAGAAACAAGA 29214
||||| || | ||| || || || | ||| || ||||| |||||||| | || |||||
Sbjct 11804 TCTCCGAGCACACCAATGCCGATAAGTTGCACACCACCAAGGAAAAGGATGGAGACAAGT 11863
Query 29215 AGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTATCAATAATCATCCATGCA 29274
| ||||| |||||| | ||| ||| ||||| | | || | ||||||||||||
Sbjct 11864 AATGACGGATAGCCACGCACAGCATTGCCAAAAGCCAGAGTGTCTACAATCATCCATGCG 11923
Query 29275 CCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAAGTCCATATGCGGAGCGGA 29334
|| || || |||| | |||||||| || | || || || ||||| ||||| || ||
Sbjct 11924 CCATAGAGAAATGCGAGACCTGCAACAACAAGCCCGATATAGGTCCACATGCGCAGAGGG 11983
Query 29335 AATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAGGTTCCATAATTTCCAGCCGTTGAAT 29394
|| || |||||| || || ||||| || || ||||||||||| ||||| || || |||
Sbjct 11984 AAGGTAGAGAAACTGGTGATACCCTCAAGAGCAAGGTTCCATAACTTCCAACCATTAAAT 12043
Query 29395 TTCGAATCACCGGCCACGCGTTCGGCACGGGCATATTTAACAACATCCGTTTTTCCGCCA 29454
|| | | || || |||||||| || |||||||||| |||||||||||| || |||
Sbjct 12044 TTTGTACTGCCTGCAACGCGTTCAGCGCGGGCATATTCAACAACATCCGTGCGACCACCA 12103
Query 29455 ACCCAACTGAGCACACCCTTCATAAACAAGTTGCGTTCTGGCATTTGTTTGATGTTCTCG 29514
||||| || || || |||||||| || | ||| | |||||||| | |||||||| |||
Sbjct 12104 ACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTCTCTCTGGCATGAGCTTGATGTTTTCG 12163
Query 29515 ACAACCGCACGGCTCATTAACCGAAAGTCGCCAACATTTTCTTCGATTTTTGGATTGCTG 29574
|| ||| ||||| ||| | || || || || |||||||| ||||| | || || |||
Sbjct 12164 ACCACCTCACGGGACATCAGACGGAAATCACCGACATTTTCCTCGATCTGCGGGTTACTG 12223
Query 29575 ATTTTATTGTGCAGCTTATAAAACCACTCAGCTGTCTTACGCTTCATGCGCCCGTCAGTT 29634
||||| ||||||| |||||| |||||||| || | ||||| |||| || | |||||
Sbjct 12224 ATTTTGTTGTGCAACTTATAGAACCACTCGGCAGATTTACGTTTCAGACGACTATCAGTG 12283
Query 29635 GAGCGGTCTGAGCGCTTAGCCAGCACCATATCCGCGCCAGCCTGCCACTTCTCAATGAGA 29694
|||||||| |||||||| ||||| ||||| || || || |||||||| ||||| || |||
Sbjct 12284 GAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGGCCCCGGCCTGCCATTTCTCTATCAGA 12343
Query 29695 TGAGGGATAACTTCTATCGGATCCTGTAAATCGACATCAATAGGAATGACCGCATCCCCG 29754
|| || || || || || || ||||| || || || ||||| || || | || || ||
Sbjct 12344 TGCGGAATGACCTCAATTGGGTCCTGCAAGTCTACGTCAATCGGGATAATTGCTTCACCT 12403
Query 29755 GTTGCATGGTCGAGACCCGCGAAAAGAGCAGGTTCTTTACCGAAGTTTCGCGTAAACGAA 29814
|| || ||||| || || ||||| | |||||| ||||| || ||||| || || || |||
Sbjct 12404 GTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCTCTTTTCCAAAGTTGCGGGTGAAGGAA 12463
Query 29815 AGCGGAATAACGAGCGGATCAGATGCAGCTATTTTGTTAATTATTGATTCAGTCGCATCT 29874
|| |||| || |||||||| | ||| | ||| || |||||||| |||||||||
Sbjct 12464 AGAGGAACCACAAGCGGATCTGCAATAGCAAGCGCGTTTATAATTGATTCGGTCGCATCT 12523
Query 29875 TTACTACCATCATTAATAAAAACGATCTCAATTTCATATTCTTTTAGCTCATTAAACTCA 29934
|| ||||| ||||| || || || ||||||| ||| | | |||| | | | ||||||
Sbjct 12524 TTGCTACCGTCATTGATGAAGACTATCTCAACTTCCTGCTGCTTTAACCCTTCAAACTCC 12583
Query 29935 CGTACCGTTTTATAGAAAATCGGTATCGTGTCTTCTTCGTTAAAAACTGGAACGACAAGA 29994
|| || | ||| ||||| || || || | || ||||| ||||| || |||||||| |||
Sbjct 12584 CGCACGGCTTTGTAGAAGATTGGAATTGCTTCCTCTTCATTAAACACCGGAACGACCAGA 12643
Query 29995 GAGATTTTCATCTTATATCCCTGAAAACAATGAATCTGGAATAGATAAAGCCGCATACCA 30054
|| |||||||| | |||||| || |||||||| | |||||||| |||||||| ||||
Sbjct 12644 GAAATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGATGAAGCCGCACACCA 12703
Query 30055 GGCTAATTGCCGAGAAAGTGATAAGGGTAATCAATGGTGGCAAG-GAACATTGGTCAGCC 30113
| || || || |||||| ||| | ||||| ||| | |||||| ||| ||||||
Sbjct 12704 GACTGATGGCGGAGAAAACGATTAACGTAAT-AATCGGGGCAAGCCCTGATTTGTCAGCA 12762
Query 30114 ATCCAGCCAACAACAGCGCTCAGTGTTCCCATGAATCCCACATACATCATGTAGCGAAGC 30173
||| ||||| | |||||||| || ||||| || || ||||||| ||||||||| |
Sbjct 12763 CACCAACCAACGGCGGCGCTCAGCGTACCCATAAACCCTACATACAGCATGTAGCGCATG 12822
Query 30174 GTGGTGGTGGTGGCATTAAAGGTGAAACGCGCATTGGCATAGAAGCTGAACGATACGGCG 30233
|| || || | | ||||||||||| | || || || | ||||| || || || ||
Sbjct 12823 GTCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTTTGCGAAAAAGCTAAATGACACCGCA 12882
Query 30234 ATAACAAAACCGGAAAAGTTCGCCAGCGCCTGATGCGTATGCATCCCATACACACAAAAA 30293
| ||||| |||| ||||| ||||| || || || || | | || | | |||
Sbjct 12883 ACTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCCTGTGTGGAAGACGTAAATAGAAATG 12942
Query 30294 GCAAATACGCCCCAATGAATAAGCGTGTTAAGAACACCGATCGATGTGTACTTAGCGAAT 30353
|| || || |||| ||||| |||||||| | |||||| || ||||||||| | ||||||
Sbjct 12943 GCGAACACAACCCAGTGAATGAGCGTGTTGATAACACCTATTGATGTGTACCTGGCGAAT 13002
Query 30354 AACTTCAACATTATGAAAATCAGCGGATTCGGAAAGGTCTGAAGTGTAGCACTACAAATT 30413
||||| |||||||| ||||||| | ||||||||||||||||||||||||| ||| ||
Sbjct 13003 AACTTTAACATTATAGAAATCAGTGAATTCGGAAAGGTCTGAAGTGTAGCATCACACATG 13062
Query 30414 GTTTTGATCGA 30424
||||||||
Sbjct 13063 CACTTGATCGA 13073
>seq997
Length=29618
Score = 156 bits (172), Expect = 1e-33
Identities = 297/439 (68%), Gaps = 25/439 (6%)
Strand=Plus/Minus
Query 6689 TGCGTCTGTCATTATCTGCATCATCGTCTGTCTTTCGTGGGCTGTTAATCATTATCGTGA 6748
|||| ||||| |||||||| | | |||| | | | ||||| |||| || ||||| ||
Sbjct 18230 TGCG-CTGTCGTTATCTGCCTGCTGGTCTTTATGGCTTGGGCGATTAACCACTATCGCGA 18172
Query 6749 TAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCCACA-------TCA---------- 6791
|||||||||||||||||||||||||||||||||||||| |||
Sbjct 18171 CAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCCACTGAGAAACTCAGCCAGGCCAA 18112
Query 6792 ----ATCATCGCTGATATGCAGAAGCGTCAACGAGATGTAGCAGAACTCGATGCCAGATA 6847
| |||| || ||||||| || || || |||| || | || ||||||| |||
Sbjct 18111 CGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCTGCGCTGGATGCCAAATA 18052
Query 6848 CACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAAACTCTCCGCGCTGATGTTTCTGC 6907
||| || | |||||||| || | | || || ||| | ||||| |||
Sbjct 18051 CACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTGCATAGCGATGTCATTGC 17992
Query 6908 TGGGCGTAAGCGCCTGCAAGTCTCCGCCACCTGTCCA---AAGTCAACGACCGGAGCCAG 6964
||| |||||||| ||||| || ||| | |||||| || | ||||||| || |
Sbjct 17991 TGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCCGCGAACGGAGCGACCGGCACCGG 17932
Query 6965 CGGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCAGATGCTGAACTCAATTATTACCG 7024
|||||||||||||| |||| |||||||| | ||||||| |||||| |
Sbjct 17931 CGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGACTCCGCTGAACGGGATTATTTCAT 17872
Query 7025 TCTCCGAAGTGGAATCGACAGGATAACCGCGCAGGTTAACTACCTGCAGGAGTACATCAG 7084
||| ||| |||||| || | || |||||| ||| |||||| | ||||| ||
Sbjct 17871 CCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTCGGCTATCTGCAGAACTACATAAG 17812
Query 7085 GAGTCAGTGCTTAAAATAA 7103
| ||||||||||||||||
Sbjct 17811 CACTCAGTGCTTAAAATAA 17793
>seq1102
Length=22075
Score = 98.7 bits (108), Expect = 3e-16
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 30653 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAGTTAAATCAAATAC 30712
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215
Query 30713 TTATGTA 30719
|||||||
Sbjct 2214 TTATGTA 2208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133664352387388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |