Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031030.1
Length=170788
Score E
Sequences producing significant alignments: (Bits) Value
seq236 134 2e-26
seq637 116 4e-21
seq995 86.0 7e-12
>seq236
Length=545527
Score = 134 bits (148), Expect = 2e-26
Identities = 109/132 (83%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 60709 TTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60768
||||| || | || || ||||| ||||||||||||||||||||||| || ||||||||
Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836
Query 60769 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828
||| ||||| || |||||||| || || || |||||||||||||| |||||||| || ||
Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776
Query 60829 CTTAACTGCATC 60840
|| ||| || ||
Sbjct 30775 CTCAACCGCGTC 30764
>seq637
Length=122170
Score = 116 bits (128), Expect = 4e-21
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 60722 GTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 60781
||||| ||||| | ||||||||| |||||||||| |||||| |||||||| || |||
Sbjct 107119 GTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACGTACT 107178
Query 60782 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828
|| || || |||||||||||||||||||| |||||||| || |||||
Sbjct 107179 GCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
>seq995
Length=29666
Score = 86.0 bits (94), Expect = 7e-12
Identities = 80/99 (81%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 68826 TGCATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTA 68884
|||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||
Sbjct 22104 TGCA-GGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACTGAGCTA 22162
Query 68885 CACATCCAAATTGGTGGGGAGTGATGGAGTCGAACCACC 68923
| || || ||||||| ||| || ||||||| ||
Sbjct 22163 ACGACCCGAAATGGTGGGCGATGACGGGCTCGAACCGCC 22201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546381347123520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |