Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq486 390 2e-103
seq65 91.5 2e-13
>seq486
Length=217039
Score = 390 bits (432), Expect = 2e-103
Identities = 1034/1576 (66%), Gaps = 26/1576 (2%)
Strand=Plus/Plus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| || || ||||||| ||| ||||| ||||| || | |||| |||| | ||||||
Sbjct 174786 GCAGGCTTAGTACGTAAATAATACATTCCAGTCTTCAAGCCCATTTTCCACGCATAGAAA 174845
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
|| || ||||| ||| ||| | || || |||| ||| || || | || |||||
Sbjct 174846 TGAATCGATGTCAATTTTCCATAGTTTGGTTCTGCTACATGGATGTTAAATGATTGACTC 174905
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982
|| || |||||||| || | ||| || ||||||| || ||||||| || || |||
Sbjct 174906 TGGTCAATGAAAGCACCACGATCCGCGGCCATTTGGATTGTGGTCTTCACAGATATCTCC 174965
Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTATTT---TGAATGGAA 77039
|| | ||| ||| ||| | | | || || | |||| || | | ||||||||
Sbjct 174966 CACACAGTCTTGTAAAGATCTCTTATTTCTTTGGGAATACTTTCAATAGACTGAATGGAT 175025
Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099
||| | |||||| ||| || |||||||||| ||| || | ||| || | |
Sbjct 175026 CCATTGTTGTGTATAATGAGATTTTTCATATCATCATCCCATAAATCAGCCTCGGTGAGA 175085
Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159
| | ||| || ||| | || || | || ||||||||||| | ||||| | ||||
Sbjct 175086 TCGCGAAGCAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAA 175145
Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219
|| || || |||| || | ||||||||||| || | ||| || ||||| || ||
Sbjct 175146 ATGTTTGAAGTGAATGGCTCAAATGATTCATTGTTGCCAAGAATCTGTGCAGTGGAGGCG 175205
Query 77220 GTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 77279
|| ||||| || |||| ||| | | || | || |||||| | ||| || | ||
Sbjct 175206 GTGGGCATGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCTTCTGCTTC 175265
Query 77280 AGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT 77339
||| |||| ||||| || |||| ||| |||| | || ||||| | |||
Sbjct 175266 AGAGCACTCCAGTCCCACAGGTCTGTGGGTGTCTTTCCCCACATTTCATATTGCAATATT 175325
Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCA 77399
|| | ||| || | ||| ||| ||||||||| || | |||| || ||||||
Sbjct 175326 CCTTCACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCA 175385
Query 77400 CAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 77459
|| || ||||| || || || ||||| || ||||| || || | | |||||| | ||
Sbjct 175386 CAGCTAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATTGAGCTTCTGG 175445
Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519
||| | ||| || | ||| | | | | ||| ||||| || | || || ||
Sbjct 175446 GCTCCTTCACTCTCGTAAGGAAGGCGCATCAATACAAAAGCATCGGCCAGACCTTGGACG 175505
Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579
||||| || ||||||| || ||| | || || |||| |||||||| | ||||| |||
Sbjct 175506 CCAATGCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCTTCTGGGACGGGATAGTAA 175565
Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTA 77639
|||| || ||||| || || || || | | | ||| ||| | ||||||||
Sbjct 175566 TTAACATCGATAATCTTGTTCAGGTTCTCAGTTATGATTTTGGTCACTTGTTTTAGTTTC 175625
Query 77640 AGAAAATCAAATCTTCCA---TCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTA 77696
||||||| || || | || | ||||||||||| | ||| || || || | ||
Sbjct 175626 TCAAAATCATATGTTTTATTTTCGGTTACAAACATGTTGACAGCAATTGACGCCAAGTTG 175685
Query 77697 CAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACAT 77756
||||| ||||| |||| ||| | || | | ||||| || |||||||| || |||
Sbjct 175686 CAAACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTCCGTGCATAGATTGCTGCAT 175745
Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816
||||| || |||| ||| | ||| ||||||||| | ||||||| || || ||||| ||
Sbjct 175746 TTGATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATG 175805
Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG----- 77871
| ||||| || || || | |||| || ||||||| ||||| | || | ||
Sbjct 175806 TATGGAGTTCCAGTCTCTACTTGTGCCTCAATAATAGCCTTCCATAGGATTTGAGCGCGG 175865
Query 77872 -CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAAT 77930
||||| | | | | | ||| ||| |||||||| ||||| ||||||
Sbjct 175866 ACTTTTTTAACAAACCT-----ACCT-TCTTGTTCATATTTCTGATATAATGCATCAAAT 175919
Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990
|||||||||||| |||| |||| ||||||| || | |||||||| | ||| ||
Sbjct 175920 TCATCTCCCCAACAATCAGCCAAGCCAGGGCTGTCGTGAGGGCACATAAGGCTCCACTCC 175979
Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050
| | | || ||| | ||||| || ||||| | ||||| |||||| || || |||
Sbjct 175980 TCGTTGTTCTCAACCCTCTTCATGAATAGATCTGAGATCCACAGAGCATAGAACAGCTCT 176039
Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110
|| | | ||| || || || || ||||| || | || || ||||| | || |||
Sbjct 176040 CGCGCGCGCACTTCCTCTTTGCCCGTGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCA 176099
Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170
| ||||| || || || || | || | | || || || || || || ||||| ||
Sbjct 176100 GCGTGCCACGGCTCGAGGTAGACGGCGAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCC 176159
Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCA 78230
| || | || ||||| || || || | || ||| || | | ||||| || ||
Sbjct 176160 ACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATGGGCACCAGCCCGTTGGAGACGCCG 176219
Query 78231 TTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTAT 78286
|| || || | || || | || | || | || |||| | || |||||
Sbjct 176220 TTCGTGCCCGCGATGTAGGTGCCTTTCGCTCTGAT----GCAATGAACATGAACTCCTAT 176275
Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346
|| || || || ||||||| || || | |||| || ||||||||||| || ||
Sbjct 176276 GCCGCCCGCGGATTTGGATATTAATGCACACTGCTTCAGAGTGTCGTAGATACCTTCGAT 176335
Query 78347 ACTGTCATCCATCATG 78362
||||| ||| |||||
Sbjct 176336 GCTGTCGTCCTTCATG 176351
Score = 89.7 bits (98), Expect = 7e-13
Identities = 96/125 (77%), Gaps = 4/125 (3%)
Strand=Plus/Plus
Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
|||||| || || |||| || || ||| ||||| |||||||| ||||||||||||||
Sbjct 176712 CTTATTGTTAATCTTCAGTAAATAAGATCGCTCCAAGGTTTTAAACCCAAAATAGTTGTA 176771
Query 78602 --TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACA 78659
||||| ||||| ||||||| ||| |||||| || | ||||||| ||| | |||
Sbjct 176772 CTTGAAA--TCTCTGTCGTAAACAATGGCAGAATCCAGCCTTTCTTTGTTTTTCATCACA 176829
Query 78660 ATATC 78664
|||||
Sbjct 176830 ATATC 176834
>seq65
Length=1244346
Score = 91.5 bits (100), Expect = 2e-13
Identities = 156/224 (70%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| || ||||| || || || || |||||||| || || | |||||
Sbjct 631693 TCATCTCTGGAGATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTTTA 631634
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284
||||| || || | |||||| ||||| ||||| ||||| || || ||||| |||||
Sbjct 631633 AGCCAGAAGATGGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATGCT 631574
Query 48285 GTAAGTCTCTCTCCGTAACTGGCTTCGTTG-TGT--ATCCACCGTTGTGCCCAATCAGCC 48341
| ||| || ||| | | || ||| || |||||| | ||||| ||||||
Sbjct 631573 ACTATTCTTTCACCGAATGTTGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTCAGCC 631514
Query 48342 TTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385
|||||||||||||| || | || || | |||||| || || ||
Sbjct 631513 TTCTTCTTTACACAGGGAAGGGTCTCAACAGCATTGAACAGGAA 631470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694653222052160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |