Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq486 399 3e-106
seq65 96.9 5e-15
>seq486
Length=217039
Score = 399 bits (442), Expect = 3e-106
Identities = 1035/1572 (66%), Gaps = 18/1572 (1%)
Strand=Plus/Plus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
|| || || ||||||| ||| ||||| ||||| || | |||| |||| | ||||||
Sbjct 174786 GCAGGCTTAGTACGTAAATAATACATTCCAGTCTTCAAGCCCATTTTCCACGCATAGAAA 174845
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
|| || ||| | ||| ||| | || || |||| ||| || || | || |||||
Sbjct 174846 TGAATCGATGTCAATTTTCCATAGTTTGGTTCTGCTACATGGATGTTAAATGATTGACTC 174905
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577
|| || |||||||| || | ||| || ||||||| || ||||||| || || |||
Sbjct 174906 TGGTCAATGAAAGCACCACGATCCGCGGCCATTTGGATTGTGGTCTTCACAGATATCTCC 174965
Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTATTT---TGAATGGAT 75634
|| | ||| ||| ||| | | | || || | |||| | || | | |||||||||
Sbjct 174966 CACACAGTCTTGTAAAGATCTCTTATTTCTTTGGGAATACTTTCAATAGACTGAATGGAT 175025
Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694
|| | |||||| ||| || || ||||||| ||| || | |||||| | |
Sbjct 175026 CCATTGTTGTGTATAATGAGATTTTTCATATCATCATCCCATAAATCAGCCTCGGTGAGA 175085
Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754
| | ||| || ||| | || || | || ||||||||||| | ||||||| ||||
Sbjct 175086 TCGCGAAGCAGGTGATGGTTGACCACCTGGAATTCTCCAGAAAGAACTCTTCTTTGGTAA 175145
Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814
|| || || |||| || | ||||||||||| || | ||| || ||||| || ||
Sbjct 175146 ATGTTTGAAGTGAATGGCTCAAATGATTCATTGTTGCCAAGAATCTGTGCAGTGGAGGCG 175205
Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874
|| ||||| || |||| ||| | | || | || |||||| | ||| || | ||
Sbjct 175206 GTGGGCATGGGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCTTCTGCTTC 175265
Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934
||| |||| ||||| || |||| ||| |||| | || ||||| | |||
Sbjct 175266 AGAGCACTCCAGTCCCACAGGTCTGTGGGTGTCTTTCCCCACATTTCATATTGCAATATT 175325
Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCG 75994
|| | || || | ||| ||| ||||| ||| ||| ||||| || |||||
Sbjct 175326 CCTTCACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCA 175385
Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054
|| || || ||||| || || ||||| || ||||| || || | | ||| || | ||
Sbjct 175386 CAGCTAGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATTGAGCTTCTGG 175445
Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114
||| | ||| || ||||| | | | | ||| ||||| || || || || ||
Sbjct 175446 GCTCCTTCACTCTCGTAAGGAAGGCGCATCAATACAAAAGCATCGGCCAGACCTTGGACG 175505
Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174
||||| || ||||||| || ||| | || || ||| |||||||| | || || |||
Sbjct 175506 CCAATGCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCTTCTGGGACGGGATAGTAA 175565
Query 76175 TTAATATCTATAATTTTATTGAGATTTCTGACAACT-ACTTTAACCACGTCCTTTAGTTT 76233
|||| ||| ||||| || || || || || | | | ||| ||| | ||||||||
Sbjct 175566 TTAACATCGATAATCTTGTTCAGGTT-CTCAGTTATGATTTTGGTCACTTGTTTTAGTTT 175624
Query 76234 GAGAAAATCAAATTTTCCATCTA---TCACAAACATATTAAGAGCTATAGATGCTAGATT 76290
||||||| || || || | | |||||||| || | ||| || || || | ||
Sbjct 175625 CTCAAAATCATATGTTTTATTTTCGGTTACAAACATGTTGACAGCAATTGACGCCAAGTT 175684
Query 76291 ACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACA 76350
||||| ||||| |||| |||| | || | | ||||||||||||||||| || ||
Sbjct 175685 GCAAACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTCCGTGCATAGATTGCTGCA 175744
Query 76351 CTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAAC 76410
||||| ||||| | ||| | ||| ||||||||| |||| |||| || || ||||| |
Sbjct 175745 TTTGATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCATGCATCTTTGTAAAGCAT 175804
Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC--- 76467
| ||||||||||| || | |||| || ||||||| ||||| | || | |||
Sbjct 175805 GTATGGAGTTCCAGTCTCTACTTGTGCCTCAATAATAGCCTTCCATAGGATTTGAGCGCG 175864
Query 76468 --TTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525
||| ||| | | || | ||| |||||||| |||||| ||||||
Sbjct 175865 GACTTTTTTA-ACAAACCTACC----TTCTTGTTCATATTTCTGATATAATGCATCAAAT 175919
Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585
|||||||||||| |||| |||| ||||| | || | || ||||| | ||||||
Sbjct 175920 TCATCTCCCCAACAATCAGCCAAGCCAGGGCTGTCGTGAGGGCACATAAGGCTCCACTCC 175979
Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645
| | | || ||||| ||||| || ||||| | ||||| |||||| || || |||
Sbjct 175980 TCGTTGTTCTCAACCCTCTTCATGAATAGATCTGAGATCCACAGAGCATAGAACAGCTCT 176039
Query 76646 CGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCA 76705
|| | | ||| || || || || ||||| || | ||||||||||| | || |||
Sbjct 176040 CGCGCGCGCACTTCCTCTTTGCCCGTGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCA 176099
Query 76706 GAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCT 76765
| ||||| || || || || | || | | || || || || || || ||||| ||
Sbjct 176100 GCGTGCCACGGCTCGAGGTAGACGGCGAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCC 176159
Query 76766 ATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCA 76825
| || | || ||||| || || || | || ||| || | | ||||| || ||
Sbjct 176160 ACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATGGGCACCAGCCCGTTGGAGACGCCG 176219
Query 76826 TTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCT 76885
|| || || | || || | || || | || | || | | ||||| ||
Sbjct 176220 TTCGTGCCCGCGATGTAGGTGCCTTTCGCTCTGATGCAATGAACATGAACTCCTATGCCG 176279
Query 76886 CCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTA 76945
|| || ||| || |||| ||||| | |||| ||||| ||||| || || || ||
Sbjct 176280 CCCGCGGATTTGGATATTAATGCACACTGCTTCAGAGTGTCGTAGATACCTTCGATGCTG 176339
Query 76946 TCATCCATCATG 76957
|| ||| |||||
Sbjct 176340 TCGTCCTTCATG 176351
>seq65
Length=1244346
Score = 96.9 bits (106), Expect = 5e-15
Identities = 157/224 (70%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| || ||||| || || || || || ||||| || || | ||||||
Sbjct 631693 TCATCTCTGGAGATCAATTCATTGCTGAAGGTCAGTCCGGGCATGAGCCCTCTCTTTTTA 631634
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| || || | |||||| ||||| ||||| ||||| || || |||||||||||
Sbjct 631633 AGCCAGAAGATGGATGCGAAACTGCCAGAGAAGAAGATGCCCTCAACTGCCGCGAATGCT 631574
Query 46774 ACAAGTCTCTCTCCGTAACTGGC-ATCATTATG--AATCCACCTTTGAGCCCAATCAGCC 46830
|| | ||| || ||| | | || || | || |||||| ||||| ||||||
Sbjct 631573 ACTATTCTTTCACCGAATGTTGCGGTCTTGCTGCCGATCCACTGCATCGCCCAGTCAGCC 631514
Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|| ||||||||||| || | || || | |||||| || || ||
Sbjct 631513 TTCTTCTTTACACAGGGAAGGGTCTCAACAGCATTGAACAGGAA 631470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712918412446080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |