Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq236 154 2e-32 seq637 120 3e-22 >seq236 Length=545527 Score = 154 bits (170), Expect = 2e-32 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 62569 CTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACC 62628 ||||| || ||||| ||| || || ||| |||| || |||||||| |||||||||||| Sbjct 30743 CTGCGCCGCGAAACGCTGATGGACGCGGTTGAGCACCCAGAAAAATACCCGCAGCTGACC 30802 Query 62629 ATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGAC 62688 || || || || |||||||| || ||||| ||||||||||| || ||||||||||||||| Sbjct 30803 ATTCGCGTGTCTGGTTATGCGGTACGCTTCAACTCTCTGACCCCAGAACAGCAGCGCGAC 30862 Query 62689 GTTATCGCTCGTACCTTCACCGAGAGTTTGTAA 62721 |||||||| |||||||| || || || ||||| Sbjct 30863 GTTATCGCGCGTACCTTTACTGAAAGCCTGTAA 30895 >seq637 Length=122170 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62575 CGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGT 62634 ||||||| ||| ||||| | | ||||| || |||||||| ||||||||||||||| Sbjct 107252 CGTGAAATGCTGCTCGATGCGATGGAACATCCTGAGAAATATCCTCAGCTGACCATCCGT 107193 Query 62635 GTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATC 62694 ||||| || || ||||| || |||||||| |||||| |||||||||| ||||||||| Sbjct 107192 GTATCTGGCTACGCAGTACGTTTTAACTCCCTGACTAAAGAACAGCAGCAGGACGTTATC 107133 Query 62695 GCTCGTACCTTCAC 62708 | ||||| ||||| Sbjct 107132 ACCCGTACTTTCAC 107119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546323748415200