Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031047.1
Length=170770
Score E
Sequences producing significant alignments: (Bits) Value
seq236 154 2e-32
seq637 120 3e-22
>seq236
Length=545527
Score = 154 bits (170), Expect = 2e-32
Identities = 126/153 (82%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 62569 CTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACC 62628
||||| || ||||| ||| || || ||| |||| || |||||||| ||||||||||||
Sbjct 30743 CTGCGCCGCGAAACGCTGATGGACGCGGTTGAGCACCCAGAAAAATACCCGCAGCTGACC 30802
Query 62629 ATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGAC 62688
|| || || || |||||||| || ||||| ||||||||||| || |||||||||||||||
Sbjct 30803 ATTCGCGTGTCTGGTTATGCGGTACGCTTCAACTCTCTGACCCCAGAACAGCAGCGCGAC 30862
Query 62689 GTTATCGCTCGTACCTTCACCGAGAGTTTGTAA 62721
|||||||| |||||||| || || || |||||
Sbjct 30863 GTTATCGCGCGTACCTTTACTGAAAGCCTGTAA 30895
>seq637
Length=122170
Score = 120 bits (132), Expect = 3e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 62575 CGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGT 62634
||||||| ||| ||||| | | ||||| || |||||||| |||||||||||||||
Sbjct 107252 CGTGAAATGCTGCTCGATGCGATGGAACATCCTGAGAAATATCCTCAGCTGACCATCCGT 107193
Query 62635 GTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATC 62694
||||| || || ||||| || |||||||| |||||| |||||||||| |||||||||
Sbjct 107192 GTATCTGGCTACGCAGTACGTTTTAACTCCCTGACTAAAGAACAGCAGCAGGACGTTATC 107133
Query 62695 GCTCGTACCTTCAC 62708
| ||||| |||||
Sbjct 107132 ACCCGTACTTTCAC 107119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546323748415200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |