Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031048.1
Length=41918
Score E
Sequences producing significant alignments: (Bits) Value
seq813 170 5e-38
seq1001 91.5 4e-14
>seq813
Length=55966
Score = 170 bits (188), Expect = 5e-38
Identities = 210/287 (73%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988
||| |||||||| |||| |||| |||||| |||||||||||||| ||||| |||
Sbjct 13481 TTCGGTGGTGTACTTCTCAGCGCCGGACTGATCGGTCCATTTACGGGTGCGCAGTTGGCC 13540
Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048
||| || | |||| ||||| ||||| || ||||| || | ||| ||||| |||||
Sbjct 13541 TTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCC 13600
Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108
|| | || |||||||||||||| ||||||||||| || || || || |||||
Sbjct 13601 AAACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACG 13660
Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168
||| ||||| || || | | | ||||||||||||||||| ||||||||||||
Sbjct 13661 CCAGGATTCGGAAGTAGCCAGCGTAATGTTGGCAACTGCGCCACCACTCGGCATGTAGCG 13720
Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTAACTGCACCTGGTTTA 27215
||||| || || | ||| | |||||||| | ||||| |||||
Sbjct 13721 TACTTCCGGGTCCTGGCCCAGATTACCGACGAGAATCACCTTGTTTA 13767
>seq1001
Length=29257
Score = 91.5 bits (100), Expect = 4e-14
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 10117 GCGTCAGCGCGTCAACGAGGCTGCAAAAGCCGTCATGCTGGCTTACGCTACTGGCGCAGA 10176
||| ||||||||||||||||| || || ||||||||||| |||||| | || ||
Sbjct 2918 GCGACAGCGCGTCAACGAGGCCGCGCGTGCGGTCATGCTGGCCTACGCTGCAGGAAGCGA 2977
Query 10177 CCTGGACCAGCTTGGCGCTAACGTGGGCGTACAGCGTCAGGTCATTACGCCTGCTGATGA 10236
||| |||||| | |||| || ||| |||| | || || || ||||| || ||
Sbjct 2978 CCTTGACCAGATAGGCGGAAATTACAACGTTGAGCGCCTTGTTATCACCCCTGCAGACGA 3037
Query 10237 CACCACCGTGCCGCCAACGCCTGCCTTCATGGAATCAGAC 10276
||| || | ||||| ||||||||| | ||||| || |||
Sbjct 3038 CACGACGTTACCGCCGACGCCTGCCGTGATGGAGTCGGAC 3077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134013144956640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |