Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031056.1 Length=157501 Score E Sequences producing significant alignments: (Bits) Value seq955 82.4 8e-11 seq952 82.4 8e-11 >seq955 Length=33606 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 142037 CTGTAGGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAGCCACCTGAGCT 142096 |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||| ||||||| Sbjct 1437 CTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCT 1496 Query 142097 AAG 142099 ||| Sbjct 1497 AAG 1499 >seq952 Length=33737 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 142037 CTGTAGGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAGCCACCTGAGCT 142096 |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||| ||||||| Sbjct 12076 CTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCT 12135 Query 142097 AAG 142099 ||| Sbjct 12136 AAG 12138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503863900598640