Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031085.1
Length=166634
Score E
Sequences producing significant alignments: (Bits) Value
seq236 199 4e-46
seq637 152 5e-32
seq995 86.0 7e-12
seq895 82.4 8e-11
>seq236
Length=545527
Score = 199 bits (220), Expect = 4e-46
Identities = 154/183 (84%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 62745 TTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 62804
||||| || |||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct 30895 TTACAGGCTTTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGA 30836
Query 62805 GTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 62864
||| ||||| || ||||| || || || || |||||||||||||| |||||||| || ||
Sbjct 30835 GTTGAAGCGTACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTG 30776
Query 62865 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACC 62924
|| ||| || || ||| ||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct 30775 CTCAACCGCGTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACC 30716
Query 62925 TTC 62927
|||
Sbjct 30715 TTC 30713
>seq637
Length=122170
Score = 152 bits (168), Expect = 5e-32
Identities = 140/177 (79%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 62754 CTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCG 62813
|| ||| || ||||| | ||||||||| |||||||||| |||||| |||||||| ||
Sbjct 107115 CTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACG 107174
Query 62814 AACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGC 62873
||||| || || |||||||||||||||||||| |||||||| || ||||| | | ||
Sbjct 107175 TACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATGTTCCATCGC 107234
Query 62874 ATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACCTTCAAT 62930
||| ||| ||||||| || ||||| ||||||||||| ||||||||||| ||
Sbjct 107235 ATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACCTTCGAT 107291
>seq995
Length=29666
Score = 86.0 bits (94), Expect = 7e-12
Identities = 80/99 (81%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 70575 TGCATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTA 70633
|||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||
Sbjct 22104 TGCA-GGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACTGAGCTA 22162
Query 70634 CACATCCAAATTGGTGGGGAGTGATGGAGTCGAACCACC 70672
| || || ||||||| ||| || ||||||| ||
Sbjct 22163 ACGACCCGAAATGGTGGGCGATGACGGGCTCGAACCGCC 22201
>seq895
Length=39754
Score = 82.4 bits (90), Expect = 8e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62758 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62817
||||| || || | || || || ||||||| || | ||||| | ||||| || ||
Sbjct 11880 GTAAACGTTCGCGAAATCACATCCTGCTGCTGCTCGCGCGTCAGGGCATTAAACCGCACC 11939
Query 62818 GCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 62877
||||| || || || ||||||||||| | ||| || || || |||||| || |||||
Sbjct 11940 GCATAGCCCGAGACGCGGATGGTCAGGTTCGGGTAGTTCTCGGGATGCGCAATGGCATCG 11999
Query 62878 TCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACCTTCAAT 62930
|| | || || || ||||| ||||||||||| || || || |||||
Sbjct 12000 AGGAGCATCTCCCGGTTCATCACGTTAACGTTCAGGTGCTGCCCGCCCTCAAT 12052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 533088845214560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |