Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq236 187 3e-42 seq637 138 1e-27 >seq236 Length=545527 Score = 187 bits (206), Expect = 3e-42 Identities = 153/185 (83%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 142541 GGTGGTCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 142600 |||||||| ||||| ||||| || || ||||| || ||||| ||| || || ||| || Sbjct 30716 GGTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCGGTTGAG 30775 Query 142601 CATCCAGAAAAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 142660 || ||||||||||| |||||| ||||||| || || || |||||||| || ||||| ||| Sbjct 30776 CACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGCTTCAAC 30835 Query 142661 TCTCTGACTCCGGAACAGCAGCGTGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAA 142720 |||||||| || ||||||||||| ||||||||||| |||||||||||||| || || ||| Sbjct 30836 TCTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGCCTGTAA 30895 Query 142721 TGGCT 142725 |||| Sbjct 30896 -GGCT 30899 >seq637 Length=122170 Score = 138 bits (152), Expect = 1e-27 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 142541 GGTGGTCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 142600 |||||||| ||||||||||| || || || ||||||| ||| ||||| | | Sbjct 107285 GGTGGTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATGGAA 107226 Query 142601 CATCCAGAAAAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 142660 ||||| || |||||||| ||| |||||||||||||||| || || ||||| || |||||| Sbjct 107225 CATCCTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTTAAC 107166 Query 142661 TCTCTGACTCCGGAACAGCAGCGTGACGTTATCGCTCGTACCTTTACTGAG 142711 || |||||| |||||||||| ||||||||| | ||||| || ||| || Sbjct 107165 TCCCTGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAG 107115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542647030867440