Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq997 205 2e-48 >seq997 Length=29618 Score = 205 bits (226), Expect = 2e-48 Identities = 399/585 (68%), Gaps = 6/585 (1%) Strand=Plus/Minus Query 403 AGAGATGGCGAG-GATGGTGCTGGTGATGATCCAACACCTGTAAATGTCACTATTCATGT 461 |||| ||||| | ||||||| ||||| ||||| || || | ||| ||| | || Sbjct 14436 AGAGCTGGCGGGTGATGGTGAGAACGATGAACCAACTCCAGTGCAGATCAATATCAACGT 14377 Query 462 TGTAGATGCGAGTAAAAAAGATGCCGAACATCAATCCAACACTGAATGTGCCTCAGGCTA 521 || || ||||| | |||| || || | || ||||| || | |||||||| Sbjct 14376 AGTGGACGCGAGGGCGGACGATGGGGATCAGC---CCGACACTTAACATTCCTCAGGCGC 14320 Query 522 ACTTCCTACAATTACCAAATAAATTTAGAGCGTTCGTTGCTGGGTTTGGTTCAGGTAAAA 581 |||||| | | | | | || || | || | |||||| ||||| ||||| ||||||| Sbjct 14319 GCTTCCTCGCAATGCAACACAAGTTCAAGGCCTACGTTGCCGGGTTCGGTTCCGGTAAAA 14260 Query 582 CATGGGTTGGTTGTTCAAGTCTTTGTGATAAGTCTTGGTCTTTCCCTAAAGTTCCGTTGG 641 ||||||| |||||| | | ||| | | ||| |||||| | || Sbjct 14259 CATGGGTGGGTTGTGGCGGCATCTGTAAGGGGATGTGGGAGCATCCTAAAATCAACCAGG 14200 Query 642 GTTACTTTGCTCCAACGTATCCGCAGATCCGAGATATCTTTTTCCCTACGATTGATGAAG 701 |||| || || || ||||| ||||||||||| || ||||| | ||| |||||||| || | Sbjct 14199 GTTATTTCGCGCCGACGTACCCGCAGATCCGTGACATCTTCTACCCGACGATTGAAGAGG 14140 Query 702 TAGCTTTCGATTGGGGATTGAA-GACAAAGATCTATGAATCTAACAAAGAAGTTGATCTT 760 | || || || ||||| ||| | || | ||| |||| |||||||| ||| | | Sbjct 14139 TCGCCTTTGACTGGGGGCTGAGCGTCATA-ATCAATGAGGGGAACAAAGAGGTTCACTTC 14081 Query 761 TACTATGGCCGCCAATATCGAAGCACAATTATTTGCCGATCAATGGAAAAGCCCAATACT 820 ||| | || || | ||| || | || | || ||||| |||||||| |||||| | Sbjct 14080 TACGAGGGGCGACGATACCGCGGGACCACAATCTGCCGTTCAATGGAGAAGCCCGGATCG 14021 Query 821 ATTGTAGGTTTTAAGATTGGTCATGCGCTGATTGATGAGCTTGATGTGATGACAAAGGTC 880 || || ||||| || || ||| | ||| || |||||||||| || || ||| | | | Sbjct 14020 ATAGTCGGTTTCAAAATCGGTAACGCGATGGTTGATGAGCTGGACGTCATGGCGGCAGCC 13961 Query 881 AAGGCTCAACAAGCTTGGCGTAAGATCATTGCTCGTATGCGATATAAACAAGCTGGTTTG 940 || || ||||| || ||||| || ||||| || |||||||| || || | ||| ||| Sbjct 13960 AAAGCGCAACAGGCATGGCGAAAAATCATAGCCCGTATGCGTTACAAGGTTGATGGGTTG 13901 Query 941 TTGAACGGTATTGATGTTGCAACAACGCCAGAGGGCTTTAAGTTC 985 ||||| || ||||| | ||||||||||| || || |||||| Sbjct 13900 CGTAACGGCATCGATGTCACCACAACGCCAGAAGGGTTCAAGTTC 13856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130272424649708