Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031117.1
Length=44885
Score E
Sequences producing significant alignments: (Bits) Value
seq1230 188 2e-43
>seq1230
Length=13776
Score = 188 bits (208), Expect = 2e-43
Identities = 406/598 (68%), Gaps = 23/598 (4%)
Strand=Plus/Plus
Query 34323 AAAAATCAAAGGTGCTGTATGAAAAAG---CGGAATAAAAAATACAACGGGAAGCAGGTT 34379
|||| | || || || | |||||||| || ||||| ||||| ||| ||||||
Sbjct 3641 AAAAGTGAAGGGGGCAGCATGAAAAAATCACGCAATAAGAAATATAACCCCCGTCAGGTT 3700
Query 34380 GTAAAGCAGAAGATTCACAAGTTTCAAATGACTTGGGAGGTTAATGAGGCTAAAAGCATT 34439
|| || |||| ||||| || ||| |||||| ||||| || ||| | ||
Sbjct 3701 CGGCTTCAAAAAGTTCATAAGTTCCAGATGTTTTGGGAAACGAATGAAGCCAAACGGATC 3760
Query 34440 ATCGAGCTTCATCACTTGCTTAATGGTGTTGATCCGCAAGAGTCTACTCATACACCGCTT 34499
|| || || ||||| ||||| ||||||| ||| | ||| || |||| |||
Sbjct 3761 ATAGAACTGCATCATTTGCTGAATGGTGAAGATTGTGATGAGGAAACGTTCTCACCACTT 3820
Query 34500 AAAGTTTGGATGAAGGCGCATAAAGGTGATCTAGCTTTAGCATTAAAGACGCAGACGATA 34559
|| || ||||||||||| |||||||| |||||||| | ||| | || | ||||| ||
Sbjct 3821 AATGTATGGATGAAGGCTCATAAAGGAGATCTAGCACTTGCACTTAAATCCCAGACCATT 3880
Query 34560 CC-AGCAGAGCAAAGTTTTCATATTGTTAGTCGAATTCATGCGGTTAATGAGAAAACAGG 34618
|| |||| | |||||||||||||| ||| |||| | ||||| || | || |||| ||
Sbjct 3881 CCGAGCA-AACAAAGTTTTCATATCGTTTGTCGTGTGCATGCTGTACAGGATCAAACTGG 3939
Query 34619 CGAAACGGTTGACTGTGAATTTCAATTAGC---TAC-----CGATACCGTTA--TGCATT 34668
|||| || ||| ||| |||||| | || | | ||| | ||| || ||
Sbjct 3940 TGAAATCGTCGACACTGAGTTTCAACTTGCATGTCCACAGTTGATGACCTTAATTGAGTT 3999
Query 34669 TGTGGCAGTTCTTAGGTGATGTTGAGTCTGATATTTATGTCAATGACGGCGGTTTTAAAA 34728
| || | | || | || | | || | ||||| ||||||| || || ||||||||||
Sbjct 4000 TTTGTCTGGTCAGA-GTCACGATGGG---GATATCTATGTCATGGATGGTGGTTTTAAAA 4055
Query 34729 AGAAATGGCTTGGCTTTAATCATGAGCT--TGAAGCTTATTTGAAAGAGGTTGGCAATGG 34786
||| |||| |||||| || | || | ||||| |||||||| || || || ||
Sbjct 4056 AGAGATGGGAGGGCTTTGATGAGGAATTAGTGAAG--TATTTGAATGATGTAGGAGATCA 4113
Query 34787 TGAATTTGTGGTTAAGACTAATCACTGTTGCTTGACATGCTTTTCAACATTCAAAAGCTT 34846
| | | ||||| | ||||| || | ||||||||||| ||||| ||||| ||
Sbjct 4114 GACCTATCACATCAAGACCATACACTGCTGTCTCACATGCTTTTCGACATTTAAAAGTTT 4173
Query 34847 TAGGCATGAAATGGAATTCAAATCAATTAAGTTAATGAATCCTGAATTTGGATTAGGA 34904
| | ||||| | || || ||| | | ||| |||||||||| |||| |||||| |||
Sbjct 4174 TCAGGATGAACTAGAGTTTAAAACGCTCAAGCTAATGAATCCAGAATATGGATTGGGA 4231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143507342690316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |