Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq754 145 1e-29 >seq754 Length=71200 Score = 145 bits (160), Expect = 1e-29 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 200092 AAGAAAGACCGTACCGGTANNNNNACCACGTCTATTTTCGGTGCACAGATGCGCTTCAAT 200151 || || ||||||||||| | || || ||||| || ||||||||||||||| Sbjct 66067 AAAAACGACCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAAT 66126 Query 200152 CTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCAC 200211 |||| || |||||||| |||||||||| ||| |||||||| || || |||||||| Sbjct 66127 TTACAGGAAGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCAT 66186 Query 200212 GAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGATAACAATGTC 200271 || ||| | |||||||| | || || ||||| | ||||||| |||| ||||| ||| Sbjct 66187 GAACTGCTCTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTC 66246 Query 200272 ACCATTTGGGACGAATGGGC 200291 |||| |||||||||||||| Sbjct 66247 TCCATCTGGGACGAATGGGC 66266 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 200512 GGGCCTGTGTATGGTAAGCAGTGGCGTGATTGGATCGGGCCAGATGGTCAACACCACGAC 200571 || || || || || ||||||||||| | ||| ||| ||||| | || ||| Sbjct 66286 GGCCCGGTTTACGGCAAGCAGTGGCGCGCATGGCCAACGCCTGATGGCCGCCATATTGAC 66345 Query 200572 CAAATCAGCACGGTCATCGACCAGCTACGTAATGATCCGGACAGTCGTCGCATTATCGTT 200631 || |||| ||| || || ||||||| || ||||| ||| || || || || ||| Sbjct 66346 CAGATCACCACCGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAATCATTGTT 66405 Query 200632 AGTGCATGGAATGTGGGTGAGTTGGATAAAATGGCTTTAGCGCCTTGCCATTCCTTCTTC 200691 || ||||| || || ||| |||| |||||||| | || || ||||| | |||||| Sbjct 66406 TCCGCCTGGAACGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACGCGTTCTTC 66465 Query 200692 CAGTTCTAC 200700 ||||||||| Sbjct 66466 CAGTTCTAC 66474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783342433152000