Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq754 194 3e-44 >seq754 Length=71200 Score = 194 bits (214), Expect = 3e-44 Identities = 227/304 (75%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 196014 ATGAAACAGTATTTGGAATTGATGCACACCGTGTTGAACGAAGGTCACGA-GAAAGCTGA 196072 |||||||||||| | ||||||||| | | ||| | | || || |||| |||| || Sbjct 66016 ATGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGG-CACGCCGAAAAACGA 66074 Query 196073 CCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGCAA 196132 |||||||||||| || || |||| ||||| || | |||||||| || | | | | Sbjct 66075 CCGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAGGA 66134 Query 196133 AGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTGTT 196192 ||| ||||| ||||| || || || | || ||||| || ||||| || |||||| | Sbjct 66135 AGGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGCT 66194 Query 196193 GTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 196252 ||||||||| | ||||| |||||| | ||||||| | || ||||||||| ||||| Sbjct 66195 CTGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATCTG 66254 Query 196253 GGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGTGC 196312 ||| || |||||||||||| | ||| | || ||||| || ||||| ||||||||||| || Sbjct 66255 GGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTGGCGCGC 66314 Query 196313 ATGG 196316 |||| Sbjct 66315 ATGG 66318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770289925861040