Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031128.1 Length=158081 Score E Sequences producing significant alignments: (Bits) Value seq974 89.7 5e-13 >seq974 Length=31311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 17510 CCGATGCCAGCACGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAG 17569 ||||| || ||||| | |||||| || | ||||||| | | ||||| || || || Sbjct 214 CCGATACCGGCACGCTGGGAAACGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAA 273 Query 17570 TCCAATGTATCACCAGTTTTGATTAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGG 17629 |||| | |||||| | ||| | ||| || ||||||||||| ||||| |||||||| Sbjct 274 TCCAGGCTGTCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGC 333 Query 17630 ACGCCGGACATAATAGGTGTTGGAAGA 17656 ||||| ||||| || || || || ||| Sbjct 334 ACGCCAGACATGATTGGCGTAGGCAGA 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505719858977840