Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq813 486 1e-132
seq651 134 9e-27
>seq813
Length=55966
Score = 486 bits (538), Expect = 1e-132
Identities = 554/744 (74%), Gaps = 0/744 (0%)
Strand=Plus/Plus
Query 96691 AGCACCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCC 96750
|| ||| |||||||| || || || || | ||||||||||| | || | |||||| ||
Sbjct 22710 AGGACCGGCATAGTTGTCGAAACGCGACCACTGGCCGTTAAAGGTCAGACGCACCGTCCC 22769
Query 96751 AATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATC 96810
|| ||||| || ||||| || || ||||| | ||||| || || |||| ||||| |
Sbjct 22770 GATCGGGCCGTTACGTTGTTTACCAATAATAATTTCGGCGATCCCTTTCAGGTCGCTGTT 22829
Query 96811 CGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGC 96870
| ||||||||| || || || || | ||||||||| | ||| || |||||||| || |
Sbjct 22830 CTCGTGATAAACCTCATCACGGTAGATAAACATGATTAAGTCGGCATCCTGCTCGATCGA 22889
Query 96871 TCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCG 96930
|| |||||||| | || || || ||||| |||||||| ||||| ||||| || || ||
Sbjct 22890 GCCGGATTCACGCAGGTCGGAGTTGACCGGACGTTTGTCGGCACGTTGTTCCAGAGAGCG 22949
Query 96931 ATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGA 96990
||||| || |||| ||||||||||| || || | || || || |||||||| || ||
Sbjct 22950 GTTAAGCTGCGACAGCGCCACCACCGGCACGTGCAGCTCTTTGGCTAACGCCTTGAGCGA 23009
Query 96991 GCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCATAAG 97050
||| ||||| ||||| || |||||||| ||||| || ||| |||||||||||| ||
Sbjct 23010 GCGGGAAATTTCGGCGATCTCCAGCGTACGGTTGTCGGAGAGCGACGGGACGCGCATCAG 23069
Query 97051 TTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGC 97110
|| |||||||||||||| || | || | ||| || | ||| | |||||| ||
Sbjct 23070 CTGAAGGTAGTCGATCATGATAAGGCCGATACCGCCGTGTTCGCGGGCGATACGACGCGC 23129
Query 97111 GCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTT 97170
||||||||| | || |||||||||||| || |||||||||||| | || || | ||
Sbjct 23130 GCGGGAACGGACTTCCGTCGGCGTCAGGCCGGAGGAGTCATCAATATAGATGTTACGTTT 23189
Query 97171 GTCCAACAGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCC 97230
|||| |||||| ||||| | ||| || | |||||||| ||||| |||| || || ||
Sbjct 23190 TTCCAGCAGAATGCCCATGGTGCCGGAGATGCGCGCCCAGTCCTCATCGTCGAGCTGACC 23249
Query 97231 TGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTG 97290
|| || || || ||||| || ||||| | || || ||||| || |||||||| | |||
Sbjct 23250 GGTACGGATGCGGGTCTGGTCCACGCGCGACAGCGATGCCAGAGAACGCATCATGATCTG 23309
Query 97291 GTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAACTGCGGCATT 97350
| | |||||||||||||| |||| || ||| |||||||| | | || |||||
Sbjct 23310 CTCGGAGGGCATCTCAAGGCTGAAAATCAGTACCGGCTTATCCTGCAACATCGCCGCATT 23369
Query 97351 TTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGAT 97410
||||||||| ||||||||||| || || || ||||| || || || |||||||| || ||
Sbjct 23370 TTCGACGAGGTTCATCGCAAATGTCGTTTTACCCATCGACGGACGCGCGGCGACGATAAT 23429
Query 97411 GAGATCGGACGACTGAAGCCCTGC 97434
| ||| |||| ||| || || ||
Sbjct 23430 CAAATCCGACGGCTGCAGACCGGC 23453
Score = 132 bits (146), Expect = 3e-26
Identities = 230/332 (69%), Gaps = 2/332 (1%)
Strand=Plus/Plus
Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766
|||| | ||| |||||||| ||||| | | || | || ||| || ||||| ||
Sbjct 13441 CGCCCAGCATCTGCATGGTACCGCCAACGTTTACCACAACTTCGGTGGTGTACTTCTCAG 13500
Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826
| |||| | ||| ||||| |||||||| |||| |||||||| |||||||||||||
Sbjct 13501 CGCCGGACTGATCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTGAGAAC 13560
Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886
|||| || | |||||||| |||| ||| || ||||| || |||| || || ||||
Sbjct 13561 CTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCGGTGCC 13620
Query 44887 ATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGTTGCGA 44946
|||| || ||||||||| | || || || || ||||| ||||| || || |
Sbjct 13621 ATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGAAGTAGCCA 13680
Query 44947 TGCTGAGTCTT-CCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTTGCCCC 45005
|| | | || | || || || ||| | || || || | | |||||||| || |||
Sbjct 13681 -GCGTAATGTTGGCAACTGCGCCACCACTCGGCATGTAGCGTACTTCCGGGTCCTGGCCC 13739
Query 45006 AGGGTACCAATCAGGATGACTTTGTTTACACC 45037
|| |||| | || || || |||||||| ||
Sbjct 13740 AGATTACCGACGAGAATCACCTTGTTTACGCC 13771
>seq651
Length=115633
Score = 134 bits (148), Expect = 9e-27
Identities = 290/429 (68%), Gaps = 6/429 (1%)
Strand=Plus/Plus
Query 102855 GGTCAACAGGAAGAAATCTGCGTCCAGTCGCTGCGCAACATCTTCACTATCAATATCAGA 102914
||||| ||||| ||| || ||||| | ||||| || |||||| || || |||||
Sbjct 27855 GGTCATCAGGATGAAGTCCGCGTCGAAACGCTGGGCGTAATCTTCCCTGTCGATATCTTC 27914
Query 102915 ATTCTGCTCAAGCAATTCATCCGCA-AATTT--GACGCTGGTAAGGCTGAAGTTATGGTC 102971
||||| || ||| || || ||| || || |||||| | | | | || | |
Sbjct 27915 GTTCTGATCGCGCAGCTCGTC-GCAGAACTTCAGACGCT--TCACGGAGCCGTCGTCGCA 27971
Query 102972 CAGTGTAAATTTAATGCGGTTCTGCCAGTCGAGTGCCAACTTAGTGACGAGCTTGCCAGC 103031
|| || | ||| || | |||||||||||| |||| ||| ||||| | ||||| ||
Sbjct 27972 CATCACGAACTGAATACGCTGCTGCCAGTCGAGCGCCAGCTTGGTGACCACTTTGCCCGC 28031
Query 103032 TTCCAGGTGTGTGGATATTTCATCACTTCCCAAGTCCTGCTTTTTCACTCGGGCAATACC 103091
||| | ||| || ||||| || || ||| |||||||| ||| | ||| | ||
Sbjct 28032 TTCGATGTGGACGGCGATTTCGTCGCTCACCAGATCCTGCTTCTTCGCGCGGATCACGCC 28091
Query 103092 GCCATCCTCAAGCACTGCCTTAAGTTCTGCCGCATCCCCCATTTGAAATCCCTGTGGAGC 103151
|||||| || |||| || || || || || |||| || || || ||||| | ||
Sbjct 28092 GCCATCTTCCAGCAGGGCTTTCAGCTCGGCTTCATCAAGGATCTGGAAACCCTGAGCCGC 28151
Query 103152 ACTACCATCACGTACCCAGTCGGTCAGCGTTAATTCAATGGGATTTTCAACACTCAGGGG 103211
| ||| |||||||| |||||||||||||| ||||| || |||| | ||| ||
Sbjct 28152 AGCACCGCTGCGTACCCATTCGGTCAGCGTTAACTCAATTGGCGTTTCCAGCGCCAGCGG 28211
Query 103212 AACAACAGGAAGAGAACCCAGAGACTTACGCATAAGCGCGAGCATATCCTCTGCCTGCCG 103271
||| || || | || || | |||||||| || || ||| |||| ||||| | |
Sbjct 28212 AACGACCGGTAACGAGCCGATGCTCTTACGCAGCAGGGCCAGCGTATCTTCTGCTTTCTT 28271
Query 103272 CGCGCTGGC 103280
||||||||
Sbjct 28272 GGCGCTGGC 28280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330891965095804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |