Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq754 179 1e-40
>seq754
Length=71200
Score = 179 bits (198), Expect = 1e-40
Identities = 301/425 (71%), Gaps = 14/425 (3%)
Strand=Plus/Plus
Query 51917 CGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAA 51976
|||| ||| |||||||||||||| |||||||| || |||||||| || || || || ||
Sbjct 66243 CGTCTCCATCTGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAA 66302
Query 51977 GCAGTGGCGTAGTTGGG--ATGC-TGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGT 52033
||||||||| ||| | || || |||| || | || || |||||| | |
Sbjct 66303 GCAGTGGCGCGCATGGCCAACGCCTGATGGCCGCCAT---ATTGACCAGATC-ACCAC-- 66356
Query 52034 CGTCA--AATCAATT-AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAA 52090
||| | || || | || |||||||| || || || |||||| || || |||||
Sbjct 66357 CGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAATCATTGTTTCCGCCTGGAA 66416
Query 52091 TGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGT 52150
|| || || |||| | |||||| |||| || ||||| | | ||||| ||||| ||
Sbjct 66417 CGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACGCGTTCTTCCAGTTCTACGT 66476
Query 52151 AGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGT 52210
||||| || ||||| || ||||| | || ||||| || || ||||| | ||| |
Sbjct 66477 CGCTGACGGAAAGCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCT 66536
Query 52211 TCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCC 52269
||||||||||||||||||||| | || | ||| |||| || | |||||| || ||
Sbjct 66537 GCCGTTTAACATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGC-AGCAGTGTGACC 66595
Query 52270 TTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAG 52329
| || || || || || | ||||| ||||| ||| |||| |||||| ||||||| | |
Sbjct 66596 TGGAAGTGGGGGATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGG 66655
Query 52330 ATCAG 52334
| |||
Sbjct 66656 AGCAG 66660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190091950242340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |