Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq754 179 1e-40 >seq754 Length=71200 Score = 179 bits (198), Expect = 1e-40 Identities = 301/425 (71%), Gaps = 14/425 (3%) Strand=Plus/Plus Query 51917 CGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAA 51976 |||| ||| |||||||||||||| |||||||| || |||||||| || || || || || Sbjct 66243 CGTCTCCATCTGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAA 66302 Query 51977 GCAGTGGCGTAGTTGGG--ATGC-TGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGT 52033 ||||||||| ||| | || || |||| || | || || |||||| | | Sbjct 66303 GCAGTGGCGCGCATGGCCAACGCCTGATGGCCGCCAT---ATTGACCAGATC-ACCAC-- 66356 Query 52034 CGTCA--AATCAATT-AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAA 52090 ||| | || || | || |||||||| || || || |||||| || || ||||| Sbjct 66357 CGTGATGAACCAGCTGAAAAACGATCCAGACTCGCGCCGAATCATTGTTTCCGCCTGGAA 66416 Query 52091 TGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGT 52150 || || || |||| | |||||| |||| || ||||| | | ||||| ||||| || Sbjct 66417 CGTCGGCGAGCTGGACAAAATGGCGCTGGCACCGTGCCACGCGTTCTTCCAGTTCTACGT 66476 Query 52151 AGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGT 52210 ||||| || ||||| || ||||| | || ||||| || || ||||| | ||| | Sbjct 66477 CGCTGACGGAAAGCTCTCCTGCCAGCTCTACCAGCGTTCCTGTGATGTGTTCCTCGGCCT 66536 Query 52211 TCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCC 52269 ||||||||||||||||||||| | || | ||| |||| || | |||||| || || Sbjct 66537 GCCGTTTAACATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGC-AGCAGTGTGACC 66595 Query 52270 TTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAG 52329 | || || || || || | ||||| ||||| ||| |||| |||||| ||||||| | | Sbjct 66596 TGGAAGTGGGGGATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGG 66655 Query 52330 ATCAG 52334 | ||| Sbjct 66656 AGCAG 66660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190091950242340