Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq813 116 1e-21 >seq813 Length=55966 Score = 116 bits (128), Expect = 1e-21 Identities = 184/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 36516 TCAGTCCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGG 36575 || ||||||||||| || || || ||||||||||| || ||||| |||||||| || || Sbjct 13512 TCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTGAGAACCTTTACGCAGA 13571 Query 36576 TATTCTCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACGATGCCACTCTGTCTGT 36635 || || || |||||||| || ||||| || || | || | || ||||| || ||||| Sbjct 13572 TACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCGGTGCCATTCAGTCTGC 13631 Query 36636 TCTTTCTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATGTTGCAACGGAAATGTTG 36695 |||||| | || || ||| ||||| ||| || || || || | | ||||||| Sbjct 13632 TCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGAAGTAGCCAGCGTAATGTTG 13691 Query 36696 ACAATTGCAGAACCTGATGCTGAA--TATTTAACTTCAGGGTCGTTTCCGAGAGTTCCGA 36753 ||| ||| ||| | | | | || ||||| ||||| | || ||| | |||| Sbjct 13692 GCAACTGCGCCACC--ACTCGGCATGTAGCGTACTTCCGGGTCCTGGCCCAGATTACCGA 13749 Query 36754 CAATAATTACTTTATTTACGCC 36775 | | ||| || || |||||||| Sbjct 13750 CGAGAATCACCTTGTTTACGCC 13771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152079960057528