Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq974 109 6e-19 >seq974 Length=31311 Score = 109 bits (120), Expect = 6e-19 Identities = 261/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 143419 TCGACACCCTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGA 143478 || ||||| |||||||||||| || ||||| |||| ||||||| ||||| ||||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 143479 TAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTC 143538 || | || ||||| ||||| || | || || || || || ||||| || || ||| Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 143539 TGGAAATGTTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGA 143598 ||||| || || |||| || ||| ||||| || |||| || || ||| | Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGG 180 Query 143599 GAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTAT 143658 || ||||| || ||| ||||||| || ||||||||||| | |||| |||| Sbjct 181 CTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTAT 240 Query 143659 TCAATTATTGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACC 143718 | | || | | | | || ||| || || | ||| ||| || || || | Sbjct 241 TTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGT 300 Query 143719 ACACAAGAACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAAT 143778 || || || || || ||||||||||| || || | |||| ||| || || || || | Sbjct 301 ACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360 Query 143779 GAAACCTGACGGGTACTTACAGCATCATAAAAACG 143813 |||| || || ||| ||||| || ||||| Sbjct 361 GAAATCTTGAACGTCGATACCGCATCGTAGAAACG 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543655008263040