Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031933.1
Length=114180
Score E
Sequences producing significant alignments: (Bits) Value
seq637 140 2e-28
seq236 93.3 3e-14
>seq637
Length=122170
Score = 140 bits (154), Expect = 2e-28
Identities = 142/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 27992 TTATATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAATGC 28051
||| || | |||||| || ||||| | |||||||| | ||| ||||| |||| |
Sbjct 107106 TTACATGGACTGAGTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGA 107165
Query 28052 GTTAAATCGAACAGCATAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATG 28111
|||||| || || || |||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct 107166 GTTAAAACGTACTGCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATG 107225
Query 28112 TTTCTGCGCATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACC 28171
|| | |||||| | ||| |||||| | | || || || || ||||||||||||||
Sbjct 107226 TTCCATCGCATCGAGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACC 107285
Query 28172 CTCGA 28176
||||
Sbjct 107286 TTCGA 107290
>seq236
Length=545527
Score = 93.3 bits (102), Expect = 3e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 28004 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAATGCGTTAAATCGAAC 28063
|||||| ||||| ||||||||| ||| ||||| | |||| | ||| || || ||
Sbjct 30883 AGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCGTAC 30824
Query 28064 AGCATAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC 28123
||||| ||||| || || ||||||| ||| || |||||||| || || | ||| ||
Sbjct 30823 CGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGCGTC 30764
Query 28124 CAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACCCTCGAC 28177
|| ||| || |||| | || || || || |||||||||||||| || ||
Sbjct 30763 CATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 365243214010794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |