Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_031946.1
Length=40443
Score E
Sequences producing significant alignments: (Bits) Value
seq986 820 0.0
seq813 161 3e-35
seq1102 95.1 3e-15
>seq986
Length=30461
Score = 820 bits (908), Expect = 0.0
Identities = 982/1331 (74%), Gaps = 2/1331 (0%)
Strand=Plus/Plus
Query 20879 TTACGCTTTAATATGTATTTAGGCCGCTGTTTGGTTTCTATGTAAATTCTACCAATATAT 20938
|||| |||||| | ||| |||||| ||| |||| || ||||| || ||||| ||
Sbjct 11744 TTACCCTTTAACAGGTAGCGAGGCCGTCCCTTGCTTTCGATATAAATCCTTCCAATGTAC 11803
Query 20939 TCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCAGGAAAAGAACAGAAACAAGA 20998
||||| || | ||| || || || | ||| || ||||| |||||||| | || |||||
Sbjct 11804 TCTCCGAGCACACCAATGCCGATAAGTTGCACACCACCAAGGAAAAGGATGGAGACAAGT 11863
Query 20999 AGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTATCAATAATCATCCATGCA 21058
| ||||| |||||| | ||| ||| ||||| | | || | ||||||||||||
Sbjct 11864 AATGACGGATAGCCACGCACAGCATTGCCAAAAGCCAGAGTGTCTACAATCATCCATGCG 11923
Query 21059 CCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAAGTCCATATGCGGAGCGGA 21118
|| || || |||| | |||||||| || | || || || ||||| ||||| || ||
Sbjct 11924 CCATAGAGAAATGCGAGACCTGCAACAACAAGCCCGATATAGGTCCACATGCGCAGAGGG 11983
Query 21119 AATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAGGTTCCATAATTTCCAGCCGTTGAAT 21178
|| || |||||| || || ||||| || || ||||||||||| ||||| || || |||
Sbjct 11984 AAGGTAGAGAAACTGGTGATACCCTCAAGAGCAAGGTTCCATAACTTCCAACCATTAAAT 12043
Query 21179 TTCGAATCACCGGCCACGCGTTCGGCACGGGCATATTTAACAACATCCGTTTTTCCGCCA 21238
|| | | || || |||||||| || |||||||||| |||||||||||| || |||
Sbjct 12044 TTTGTACTGCCTGCAACGCGTTCAGCGCGGGCATATTCAACAACATCCGTGCGACCACCA 12103
Query 21239 ACCCAACTGAGCACACCCTTCATAAACAAGTTGCGTTCTGGCATTTGTTTGATGTTCTCG 21298
||||| || || || |||||||| || | ||| | |||||||| | |||||||| |||
Sbjct 12104 ACCCAGCTCAGAACTCCCTTCATGAAGAGGTTTCTCTCTGGCATGAGCTTGATGTTTTCG 12163
Query 21299 ACAACCGCACGGCTCATTAACCGAAAGTCGCCAACATTTTCTTCGATTTTTGGATTGCTG 21358
|| ||| ||||| ||| | || || || || |||||||| ||||| | || || |||
Sbjct 12164 ACCACCTCACGGGACATCAGACGGAAATCACCGACATTTTCCTCGATCTGCGGGTTACTG 12223
Query 21359 ATTTTATTGTGCAGCTTATAAAACCACTCAGCTGTCTTACGCTTCATGCGCCCGTCAGTT 21418
||||| ||||||| |||||| |||||||| || | ||||| |||| || | |||||
Sbjct 12224 ATTTTGTTGTGCAACTTATAGAACCACTCGGCAGATTTACGTTTCAGACGACTATCAGTG 12283
Query 21419 GAGCGGTCTGAGCGCTTAGCCAGCACCATATCCGCGCCAGCCTGCCACTTCTCAATGAGA 21478
|||||||| |||||||| ||||| ||||| || || || |||||||| ||||| || |||
Sbjct 12284 GAGCGGTCAGAGCGCTTGGCCAGTACCATGTCGGCCCCGGCCTGCCATTTCTCTATCAGA 12343
Query 21479 TGAGGGATAACTTCTATCGGATCCTGTAAATCGACATCAATAGGAATGACCGCATCCCCG 21538
|| || || || || || || ||||| || || || ||||| || || | || || ||
Sbjct 12344 TGCGGAATGACCTCAATTGGGTCCTGCAAGTCTACGTCAATCGGGATAATTGCTTCACCT 12403
Query 21539 GTTGCATGGTCGAGACCCGCGAAAAGAGCAGGTTCTTTACCGAAGTTTCGCGTAAACGAA 21598
|| || ||||| || || ||||| | |||||| ||||| || ||||| || || || |||
Sbjct 12404 GTAGCGTGGTCTAGGCCGGCGAATAAAGCAGGCTCTTTTCCAAAGTTGCGGGTGAAGGAA 12463
Query 21599 AGCGGAATAACGAGCGGATCAGATGCAGCTATTTTGTTAATTATTGATTCAGTCGCATCT 21658
|| |||| || |||||||| | ||| | ||| || |||||||| |||||||||
Sbjct 12464 AGAGGAACCACAAGCGGATCTGCAATAGCAAGCGCGTTTATAATTGATTCGGTCGCATCT 12523
Query 21659 TTACTACCATCATTAATAAAAACGATCTCAATTTCATATTCTTTTAGCTCATTAAACTCA 21718
|| ||||| ||||| || || || ||||||| ||| | | |||| | | | ||||||
Sbjct 12524 TTGCTACCGTCATTGATGAAGACTATCTCAACTTCCTGCTGCTTTAACCCTTCAAACTCC 12583
Query 21719 CGTACCGTTTTATAGAAAATCGGTATCGTGTCTTCTTCGTTAAAAACTGGAACGACAAGA 21778
|| || | ||| ||||| || || || | || ||||| ||||| || |||||||| |||
Sbjct 12584 CGCACGGCTTTGTAGAAGATTGGAATTGCTTCCTCTTCATTAAACACCGGAACGACCAGA 12643
Query 21779 GAGATTTTCATCTTATATCCCTGAAAACAATGAATCTGGAATAGATAAAGCCGCATACCA 21838
|| |||||||| | |||||| || |||||||| | |||||||| |||||||| ||||
Sbjct 12644 GAAATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGATGAAGCCGCACACCA 12703
Query 21839 GGCTAATTGCCGAGAAAGTGATAAGGGTAATCAATGGTGGCAAG-GAACATTGGTCAGCC 21897
| || || || |||||| ||| | ||||| ||| | |||||| ||| ||||||
Sbjct 12704 GACTGATGGCGGAGAAAACGATTAACGTAAT-AATCGGGGCAAGCCCTGATTTGTCAGCA 12762
Query 21898 ATCCAGCCAACAACAGCGCTCAGTGTTCCCATGAATCCCACATACATCATGTAGCGAAGC 21957
||| ||||| | |||||||| || ||||| || || ||||||| ||||||||| |
Sbjct 12763 CACCAACCAACGGCGGCGCTCAGCGTACCCATAAACCCTACATACAGCATGTAGCGCATG 12822
Query 21958 GTGGTGGTGGTGGCATTAAAGGTGAAACGCGCATTGGCATAGAAGCTGAACGATACGGCG 22017
|| || || | | ||||||||||| | || || || | ||||| || || || ||
Sbjct 12823 GTCGTTGTAGAAGACTTAAAGGTGAACCTGGCGTTTGCGAAAAAGCTAAATGACACCGCA 12882
Query 22018 ATAACAAAACCGGAAAAGTTCGCCAGCGCCTGATGCGTATGCATCCCATACACACAAAAA 22077
| ||||| |||| ||||| ||||| || || || || | | || | | |||
Sbjct 12883 ACTACAAATCCGGCGAAGTTAGCCAGAGCTTGCCCTGTGTGGAAGACGTAAATAGAAATG 12942
Query 22078 GCAAATACGCCCCAATGAATAAGCGTGTTAAGAACACCGATCGATGTGTACTTAGCGAAT 22137
|| || || |||| ||||| |||||||| | |||||| || ||||||||| | ||||||
Sbjct 12943 GCGAACACAACCCAGTGAATGAGCGTGTTGATAACACCTATTGATGTGTACCTGGCGAAT 13002
Query 22138 AACTTCAACATTATGAAAATCAGCGGATTCGGAAAGGTCTGAAGTGTAGCACTACAAATT 22197
||||| |||||||| ||||||| | ||||||||||||||||||||||||| ||| ||
Sbjct 13003 AACTTTAACATTATAGAAATCAGTGAATTCGGAAAGGTCTGAAGTGTAGCATCACACATG 13062
Query 22198 GTTTTGATCGA 22208
||||||||
Sbjct 13063 CACTTGATCGA 13073
>seq813
Length=55966
Score = 161 bits (178), Expect = 3e-35
Identities = 244/346 (71%), Gaps = 1/346 (0%)
Strand=Plus/Plus
Query 26637 GCCACCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATC 26696
||| || ||||| |||||||| || |||||| || | |||||||| ||| || ||
Sbjct 13439 GCCGCCCAGCATCTGCATGGTACCGCCAACGTTTACCACAACTTCGGTGGTGTACTTCTC 13498
Query 26697 CTGTCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 26756
| | ||||| |||||| | || |||| || |||||| | ||| |||| |||
Sbjct 13499 AGCGCCGGACTGATCGGTCCATTTACGGGTGCGCAGTTGGCCTTCGATATAGACCTGAGA 13558
Query 26757 ACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTG 26816
|||||| ||||||||||| | ||||| |||||||||||| || || ||||| |||||
Sbjct 13559 ACCTTTACGCAGATACTCACCGGCAACTTCTGCCAGTTTGCCAAACAGCACCACGCGGTG 13618
Query 26817 CCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGC 26876
||| || |||||||| || ||| || || ||||||||||| ||| || |||||
Sbjct 13619 CCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGAAGTAGC 13678
Query 26877 AACTGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATGCC 26936
| |||| ||| |||| || || | | || || | | ||| || || || |
Sbjct 13679 CAGCGTAATGTTGGCAACTG-CGCCACCACTCGGCATGTAGCGTACTTCCGGGTCCTGGC 13737
Query 26937 CAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 26982
| || ||| | | |||||||| |||||||||||||| |||||
Sbjct 13738 CCAGATTACCGACGAGAATCACCTTGTTTACGCCTCTGCTGGCCAT 13783
>seq1102
Length=22075
Score = 95.1 bits (104), Expect = 3e-15
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 22437 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAGTTAAATCAAATAC 22496
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2274 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATCTAAATCAATAAG 2215
Query 22497 TTACGTA 22503
||| |||
Sbjct 2214 TTATGTA 2208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129293245510340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |