Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq197 167 6e-36
seq1030 165 2e-35
>seq197
Length=620651
Score = 167 bits (184), Expect = 6e-36
Identities = 165/211 (78%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||||| |||||||| || |||||||| || || ||| ||||||
Sbjct 447873 CAGATTTTCGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTCAGAC 447814
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| || || |||||||| ||||| ||
Sbjct 447813 ACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAACAG 447754
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || |||||||| || ||||| | || |||| |||| || ||| |
Sbjct 447753 CGTCTCATCTTCGCTGGTAAACAGCTGGAGGATGGTCGCAC-CTTGTCCGACTACAACAT 447695
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || ||||||||||||
Sbjct 447694 TCAGAAGGAGTCTACCCTCCATCTTGTTTTG 447664
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| || || |||||| ||||||
Sbjct 449086 CAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTGGAAGCTTCAGAC 449027
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| ||||| |||||||| ||||||||
Sbjct 449026 ACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAGCAG 448967
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||||||||| ||||| || ||||| || | || | | || ||||| ||
Sbjct 448966 CGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCTGACTATAATATC 448907
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| ||||| || || ||||
Sbjct 448906 CAGAAAGAGTCAACCCTTCA-CTTG 448883
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| || || ||| ||||||
Sbjct 446701 CAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTAGAAGTCGAAGCTTCAGAC 446642
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| ||||| || ||||||||||||||
Sbjct 446641 ACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAGCAG 446582
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| ||||| || | || | | || || ||| ||
Sbjct 446581 CGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAACATC 446522
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || ||||||||||| ||||| ||
Sbjct 446521 CAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGA 446483
Score = 161 bits (178), Expect = 2e-34
Identities = 164/211 (78%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| || || || ||| ||||||
Sbjct 447385 CAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACTCTGGAAGTTGAAGCTTCAGAC 447326
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| |||||| ||||| || |||||||| ||||| || || ||||||||
Sbjct 447325 ACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCAG 447266
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
| | ||||| || || || ||||| ||||| || | || |||| |||| || ||| |
Sbjct 447265 AGGTTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGCAC-CTTGTCCGACTACAACAT 447207
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||| |||||||| || || ||||||||||||
Sbjct 447206 CCAGAAAGAATCTACCCTCCATCTTGTTTTG 447176
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| || || ||| ||||||
Sbjct 448329 CAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTGGAAGTCGAAGCTTCAGAC 448270
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| ||||| || ||||||||||||||
Sbjct 448269 ACCATCGAGAATGTAAAGGCTAAGATCCAAGACAAGGAAGGCATTCCTCCGGACCAGCAG 448210
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| ||||| || | || | | || || ||| ||
Sbjct 448209 CGTCTGATCTTCGCTGGTAAGCAGCTAGAAGACGGCCGCACCTTATCTGACTACAACATC 448150
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || ||||||||||| ||||| ||
Sbjct 448149 CAGAAGGAGTCTACCCTTCATCTTGTTTTACGACTCCGA 448111
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| || || || ||| ||||||
Sbjct 446929 CAGATTTTCGTGAAAACCCTAACTGGCAAGACAATCACTCTGGAAGTTGAAGCTTCAGAC 446870
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| || ||||| ||||| |||||||| ||||||||
Sbjct 446869 ACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAGCAG 446810
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||||||||| ||||| || ||||| || | || | | || ||||| ||
Sbjct 446809 CGACTTATCTTCGCCGGTAAACAACTAGAAGACGGCCGTACATTGTCAGACTATAATATC 446750
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || || || ||||
Sbjct 446749 CAGAAAGAGTCGACTCTTCA-CTTG 446726
Score = 149 bits (164), Expect = 2e-30
Identities = 159/206 (77%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| ||||| || ||||| || ||||| || || || ||| || |||
Sbjct 446473 CAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCGGAC 446414
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || || || || || ||||||||
Sbjct 446413 ACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAG 446354
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || ||||||||||| |||||||| || ||||| | || |||| |||| || ||| |
Sbjct 446353 CGTCTCATCTTCGCCGGTAAACAGCTGGAGGATGGTCGCAC-CTTGTCCGACTACAACAT 446295
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
|||||| || || || || || ||||
Sbjct 446294 CCAAAAGGAGTCCACCCTTCA-CTTG 446270
Score = 145 bits (160), Expect = 2e-29
Identities = 158/206 (77%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || ||||| ||||| | ||||| || |||||
Sbjct 449789 CAGATATTCGTGAAGACCCTGACTGGGAAAACCATCACTTTGGAGGTCGAGCCTGCAGAC 449730
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| ||||||||||| || ||||| || ||||||||
Sbjct 449729 ACCATCGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGCATCCCGCCCGACCAGCAG 449670
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || |||||||| || || ||||| ||||| || | || |||| |||| || ||| |
Sbjct 449669 CGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCAC-CTTGTCCGACTACAACAT 449611
Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128
||| ||||| || || ||||| ||||
Sbjct 449610 CCAGAAAGAGTCCACCCTGCA-CTTG 449586
Score = 140 bits (154), Expect = 8e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || ||||| || ||||| || || || ||| ||||||
Sbjct 448586 CAGATCTTTGTCAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCAGAC 448527
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| ||| ||||| |||||| ||||| || |||||||| ||||| || || ||||||||
Sbjct 448526 ATCATTGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCAG 448467
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
| | ||||||||||| || ||||| || ||||| | || |||| |||| || ||| |
Sbjct 448466 AGGTTGATCTTCGCCGGCAACCAGCTAGAGGATGGTCGCAC-CTTGTCCGACTACAACAT 448408
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || ||||||||||||
Sbjct 448407 TCAGAAGGAGTCTACCCTCCATCTTGTTTTG 448377
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| ||||| || ||||| || ||||| || || || ||| || |||
Sbjct 448101 CAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCGGAC 448042
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || || ||||| || ||||||||
Sbjct 448041 ACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAG 447982
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || || || |||||||| | || || |||| || ||| |
Sbjct 447981 CGTCTGATCTTCGCTGGTAAGCAACTAGAAGATGGCCGCACCCTATCCGACTACAACATT 447922
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 447921 CAGAAGGAGTCCACTCTTCA-CTTG 447898
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || || ||||| || |||||| |||||||
Sbjct 449561 CAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCAGAC 449502
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || || ||||| || |||||||| ||||| || || ||||||||
Sbjct 449501 ACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCAG 449442
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || |||||| | || ||||| | || || | || || ||| ||
Sbjct 449441 AGGTTGATCTTTGCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAACATC 449382
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || ||||| ||||
Sbjct 449381 CAGAAAGAGTCCACCCTGCA-CTTG 449358
Score = 120 bits (132), Expect = 7e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||||||||| || ||||| || ||||| || || || ||| ||||||
Sbjct 448858 CAGATTTTCGTGAAAACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCAGAC 448799
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| |||||| ||||| || ||||| || || |||||||| ||||| ||
Sbjct 448798 ACCATTGAGAATGTCAAAGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAACAG 448739
Query 178044 CGACTTATCTTCGC 178057
|| || ||||||||
Sbjct 448738 CGTCTCATCTTCGC 448725
Score = 111 bits (122), Expect = 4e-19
Identities = 163/237 (69%), Gaps = 33/237 (14%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| || || ||| ||||||
Sbjct 447645 CAGATTTTCGTGAAAACCCTGACTGGTAAGACCATCACCCTGGAAGTCGAAGCTTCAGAC 447586
Query 177984 ACCATCGAGAACGTCAA--------------ACAA------------------AAGATTC 178011
||||||||||| || || |||| ||||| |
Sbjct 447585 ACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCGCCAAGATCC 447526
Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071
| ||||| || || |||||||| |||||||| ||||||||||||||||| ||||| || |
Sbjct 447525 AAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGACTTATCTTCGCCGGTAAACAACTAG 447466
Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|||| || | || | | || ||||| |||| ||||| ||||| || || ||||
Sbjct 447465 AAGACGGCCGTACATTGTCTGACTATAATATCCAGAAAGAGTCAACCCTTCA-CTTG 447410
Score = 107 bits (118), Expect = 5e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || || ||||| || |||||| |||||||
Sbjct 449333 CAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCAGAC 449274
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| || || ||||| || |||||||| ||||| || || ||||||||
Sbjct 449273 ACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCAG 449214
Query 178044 CGACTTATCTTCGCCGGAAAACAG 178067
| | ||||| || || ||||||
Sbjct 449213 AGGTTGATCTTTGCAGGCAAACAG 449190
>seq1030
Length=27445
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 2897 CAGATCTTCGTGAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGGCTTCCGAC 2838
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 2837 ACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 2778
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| |||||||| || |||||||| || ||||| | || || |||| || ||| ||
Sbjct 2777 CGACTGATCTTCGCTGGTAAACAGCTGGAGGATGGCCGTACCCTGTCCGACTACAACATC 2718
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || || | || ||||| || |||
Sbjct 2717 CAGAAGGAATCTACCCTTCACTTGGTGTTGAGGCTTAGA 2679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203703531486036
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