Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4254 91.5 2e-13 >seq4254 Length=3256360 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| |||| ||| ||||| ||| ||||| | || ||||| |||||||||||| Sbjct 698371 CTTCATCTCGTGAGATGAGTTCATTGCTGAAAGTAAGGCCAGGCATGATTCCTCGTTTCT 698430 Query 16284 TTAACCAGAATATCGCAGC-AAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 | ||||| ||||||||||| ||| ||| | |||| || ||||| ||||| | ||||||| Sbjct 698431 TCAACCAAAATATCGCAGCGAAACTACCGCTAAAA-AAAATACCTTCAACCGCTGCAAAA 698489 Query 16343 GCGATTAATCGTTC 16356 || | || ||||| Sbjct 698490 GCAACTATACGTTC 698503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511384706001400