Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4241 89.7 3e-13 >seq4241 Length=1709304 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| ||||||||||| || || | | | || ||||||||||| || || || Sbjct 640194 TTCTTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCTTCCAACTGCTTTCCAGCAAA 640253 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGAT 34316 || || || ||||| || ||| | | || ||||| || ||| || |||| || Sbjct 640254 GATCAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTGAAT-TTTAGCTTTTACAT 640312 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 |||| | || | | ||| || || | ||||| ||||| || || |||||||||| Sbjct 640313 TTTCTATTGTGTCAGAAGCTTCCACCTCAAGAGTGATTGTTTTTCCAGTAAGAGTTTTCA 640372 Query 34377 CAAAGATCTGCAT 34389 ||||||| ||||| Sbjct 640373 CAAAGATTTGCAT 640385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323053710591200