Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4296 84.2 4e-11 >seq4296 Length=1824142 Score = 84.2 bits (92), Expect = 4e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308 |||||| ||| ||| || || || || | |||||| |||| || ||| | |||||| Sbjct 1062682 TTCTGGCGAGCAGTGGTTGAGGAGCTTTTGTGGTTTATCAAAGGATCAACAAATGCCAAA 1062741 Query 35309 GAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGAC 35368 | || | | ||| | || |||||| | | ||| | || || | |||||||| Sbjct 1062742 CACTTAACAGATAAGGGTGTTCATATCTGGGATGAAAATAGTTCACGAGCTTTTTTGGAT 1062801 Query 35369 AGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGG 35428 | | || || ||||||| || || |||||||| || || || || || |||||| Sbjct 1062802 TCTTGCGGCTTCACTGATAGAGAGGAAGGTGATTTGGGGCCTGTTTATGGCTTTCAATGG 1062861 Query 35429 CGTCATTTTGGTGCTGAATAT 35449 || || ||||||||||||||| Sbjct 1062862 CGGCACTTTGGTGCTGAATAT 1062882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989525105835975