Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4254 109 5e-19 >seq4254 Length=3256360 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 13927 GAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATC 13986 ||||| || || || || ||||| |||||| || || || || || ||||| || || Sbjct 698784 GAAATATAAGTTTCGATTAGTAAAGAATACATCTCCGAATGAATATTCTCTATGGCGATT 698843 Query 13987 TGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCC-GAGTAAAATCTTTCTGC 14045 || |||||||||||||| | ||||| | || ||||||| || | |||||| || Sbjct 698844 TGGAAACCATAAAAACAGCGTGCTTCGGCAATTTTTACCTCCTGACT-AAATCTCTCAAT 698902 Query 14046 CAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14105 || |||||||||||||||||||| ||| || ||||||||||| | | |||||| Sbjct 698903 TAAATTTTCATTAACAATACCATCGGAAGCAGCGAAAAATGCCAAGACATGAGAAATAAA 698962 Query 14106 GTATTGCTCTTC 14117 |||| ||| || Sbjct 698963 GTATCTCTCGTC 698974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478561011937800