Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq4196 82.4 5e-11 >seq4196 Length=1840941 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| |||| ||||| || || || || | |||||||| ||| | || | || || | Sbjct 1068739 CATCCTCCAGCTGTTTGCCAGCGAAGATGAGTCGTTGCTGATCCGGTGGAATTCCCTCCT 1068680 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| ||| || |||||| | ||| ||||| | | ||| || |||| || | Sbjct 1068679 TATCTTGAATCTTGGCTTTGACATTTTCAATGGTATCGGAGGCCTCTACCTCGAGGGTGA 1068620 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | |||||||| || | ||||||||||| ||||||||| Sbjct 1068619 TGGTTTTACCCGTGAGGGTCTTCACAAAGATTTGCATG 1068582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354757515707460