Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq4241 84.2 2e-11 >seq4241 Length=1709304 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 21918 AAAATTGCCGATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTATCTTTGCTGGC 21974 |||||| || |||||||| | ||||| | |||||| | | |||||||||||| Sbjct 639284 AAAATTCAGGACAAAGAGGGCATTCCACCTG---ATCAACAGCGTTTAATCTTTGCTGGC 639228 Query 21975 AAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTT 22034 ||||| || ||||| | |||| | |||||||||| ||||| |||||||| || ||| Sbjct 639227 AAACAGCTGGAAGACGGCAGAACTCTTTCCGATTACAACATTCAAAAGGAATCCACACTT 639168 Query 22035 CATATGGTATTACGTTTACGAGGAGG 22060 || | || ||||| | || ||||| Sbjct 639167 CACTTAGTTTTACGACTTCGTGGAGG 639142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358104526219330