Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq4227 84.2 5e-13 >seq4227 Length=580990 Score = 84.2 bits (92), Expect = 5e-13 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || |||||||| ||| | || ||| | || |||| | ||| || |||||| | Sbjct 270289 TGCACGTTCCACAAATATGGTGCGTCCGGCACGGTGCAAAAATTCGACGGTCTCTGCGTG 270230 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 | ||| ||| | |||||||||||||||||| | ||| |||||||||||||| Sbjct 270229 TTGCCGCTCAACATCGTCAACGAGAAGATCTACGTGTTCATCTGGTTCTGGTTC 270176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479365957500