Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4196 86.0 7e-12 >seq4196 Length=1840941 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 46396 TGTACTCTCCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGC 46454 ||| | | ||||| ||||||||||| || || |||||||| | || || ||||| |||| Sbjct 1068781 TGTTCGCACCTTTCTGGATATTGTAATCTGAGAGAGTGCGTCCATCCTCCAGCTGTTTGC 1068722 Query 46455 CGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCT 46514 | ||||| || | || ||||| || | || | | |||||| || ||||| | Sbjct 1068721 CAGCGAAGATGAGTCGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTGAATCTTGGCTT 1068662 Query 46515 TGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCG 46574 ||| | | | || ||| | || || || | ||||||||||| ||||| || | Sbjct 1068661 TGACATTTTCAATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGG 1068602 Query 46575 TTTTAACAAAGATTTGCAT 46593 | || |||||||||||||| Sbjct 1068601 TCTTCACAAAGATTTGCAT 1068583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565205580845400