Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4254 102 1e-16 >seq4254 Length=3256360 Score = 102 bits (112), Expect = 1e-16 Identities = 132/181 (73%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 37428 TTTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 ||||||| ||| | |||||||| || ||||||||| |||||| || || |||||| Sbjct 698769 TTTTCTTTGAGATCAGAAATATAAGTTTCGATTAGTAAAGAATACATCTCCGAATGAATA 698828 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTA 37547 || || || || || || |||||||||||||| | ||||| | | || || || | | Sbjct 698829 TTCTCTATGGCGATTTGGAAACCATAAAAACAGCGTGCTTCGGCAATTTTTACCTCCTGA 698888 Query 37548 AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAG-CAAG 37606 ||| |||| | ||| ||||||||||| || ||||| ||| || || || | |||| Sbjct 698889 CTAAATCTCTCAATTAAATTTTCATTAACAATACCATCGGAAGCAGCGAAAAATGCCAAG 698948 Query 37607 A 37607 | Sbjct 698949 A 698949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592282408605800