Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4224 100 5e-16 >seq4224 Length=2981193 Score = 100 bits (110), Expect = 5e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 ||||||| ||| || || |||||||||| | |||||| || || |||||||| ||||| Sbjct 1603214 TTGAGCAGCTTGACCTTGTCCTCCAGCCTGGAGATGCGCTCGAGCTTGCGCCGTCGGCAC 1603273 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| || |||| |||||| | | ||||| | ||| |||||| ||||| | | Sbjct 1603274 TTGGAAGCGGCCACGCGGTTTCTTTGCCTCTTCCTCTCCAACTTGATCTTCTCCTGATTC 1603333 Query 241610 TCCATGTCGATCGGAGAC 241627 |||||||||||||| ||| Sbjct 1603334 TCCATGTCGATCGGCGAC 1603351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931478712876800