Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq4296 140 4e-28 >seq4296 Length=1824142 Score = 140 bits (154), Expect = 4e-28 Identities = 164/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 || ||||| ||| |||| ||||| ||||| || | ||||| |||| |||| |||||| Sbjct 1062703 GAGCTTTTGTGGTTTATCAAAGGATCAACAAATGCCAAACACTTAACAGATAAGGGTGTT 1062762 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 | | ||| |||| ||| |||| || | ||||| |||| ||||| || ||||| ||| Sbjct 1062763 CATATCTGGGATGAAAATAGTTCACGAGCTTTTTTGGATTCTTGCGGCTTCACTGATAGA 1062822 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 | ||||||||||| || || ||||||| ||||||||| | || || ||| ||||| Sbjct 1062823 GAGGAAGGTGATTTGGGGCCTGTTTATGGCTTTCAATGGCGGCACTTTGGTGCTGAATAT 1062882 Query 172581 ATCGACTGTG-ATACAGATTACACAGGACAAGG-AGTG 172616 | || | || | ||||||||||| |||||||| |||| Sbjct 1062883 AAAGA-TATGCACACAGATTACACGGGACAAGGTAGTG 1062919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632452876072600