Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq4296 125 9e-24 >seq4296 Length=1824142 Score = 125 bits (138), Expect = 9e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587 || ||||| ||| |||| ||||| ||||| || | ||||| |||| |||| |||||| Sbjct 1062703 GAGCTTTTGTGGTTTATCAAAGGATCAACAAATGCCAAACACTTAACAGATAAGGGTGTT 1062762 Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647 | | ||| | || ||| |||| || | ||||| |||| || || || || || ||| Sbjct 1062763 CATATCTGGGATGAAAATAGTTCACGAGCTTTTTTGGATTCTTGCGGCTTCACTGATAGA 1062822 Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707 | ||||||||||| || || ||||||| ||||||||| | || || ||| ||||| Sbjct 1062823 GAGGAAGGTGATTTGGGGCCTGTTTATGGCTTTCAATGGCGGCACTTTGGTGCTGAATAT 1062882 Query 168708 ATTGACTGTG-ATACAGATTACACCGGACAAGG 168739 | || | || | ||||||||||| |||||||| Sbjct 1062883 AAAGA-TATGCACACAGATTACACGGGACAAGG 1062914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635140720000600