Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq4241 100 2e-16 >seq4241 Length=1709304 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 ||||| || || || || ||| || ||||| || || ||||||| ||| |||| || Sbjct 639154 CGTAAAACTAAGTGAAGTGTGGATTCCTTTTGAATGTTGTAATCGGAAAGAGTTCTGCCG 639213 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||||||||| ||||| || | |||||| || || | || | || ||||||| Sbjct 639214 TCTTCCAGCTGTTTGCCAGCAAAGATTAAACGCTGTTGATCAGGTGGAATGCCCTCTTTG 639273 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||||| ||||| | | | ||||| | ||| || || | ||||| Sbjct 639274 TCCTGAATTTTGGCTTTGACGTTTTCTATGGTATCCGAAGCCTCAACTTCAAGGGTGATG 639333 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| || || || || || ||||| ||||| Sbjct 639334 GTTTTTCCTGTGAGTGTCTTGACGAAGATCTGCAT 639368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429521283020885