Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq326 89.7 1e-12 seq20 89.7 1e-12 seq18 89.7 1e-12 seq6 89.7 1e-12 seq2 89.7 1e-12 >seq326 Length=65859 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 45817 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 45876 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 45877 CCCACGTTGGGC 45888 >seq20 Length=1699735 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 485539 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 485480 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 485479 CCCACGTTGGGC 485468 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 531613 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 531554 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 531553 CCCACGTTGGGC 531542 >seq18 Length=1847082 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 906865 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 906806 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 906805 CCCACGTTGGGC 906794 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1279642 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1279583 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1279582 CCCACGTTGGGC 1279571 >seq6 Length=2768319 Score = 89.7 bits (98), Expect = 1e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 61363 TAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGT 61422 ||||||||||| | |||||||| |||| || || | || || |||||| |||||| Sbjct 1228660 TAGACTCTAAACGGGATTGGGGTCATGCTCGTGACTACGTTGAAGCAATGTGGATGATGT 1228719 Query 61423 TGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTG 61482 ||||||||||||| ||| | || || ||||| || ||||| |||| ||||| || | Sbjct 1228720 TGCAACAAGATACACCAAAGGATTATGTTATAGCAACTGGGGAGACACACAGTGTTCGGG 1228779 Query 61483 AATTCGT 61489 |||| || Sbjct 1228780 AATTTGT 1228786 >seq2 Length=3528708 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 420085 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 420144 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 420145 CCCACGTTGGGC 420156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2917552 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2917611 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2917612 CCCACGTTGGGC 2917623 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| || |||| |||||||||||||||| Sbjct 380329 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTCATCTCAGGGTCGTGGGTTCGAGC 380270 Query 165770 CCCACGATGGGCA 165782 |||||| |||||| Sbjct 380269 CCCACGTTGGGCA 380257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057624833227850