Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq170 131 2e-25 >seq170 Length=322284 Score = 131 bits (144), Expect = 2e-25 Identities = 223/321 (69%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 || || || || || || || |||||||| || ||||||||| || |||||| ||| Sbjct 24404 TCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTCATCCCAATAAGATTTACA 24345 Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC- 16917 || || || || ||||||||| | || || || || || || || || || | Sbjct 24344 GGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCCTCTGAGATTAT-CTCGAT 24286 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || ||| ||| | || | ||| ||||||||| ||||| | ||| || |||||||| Sbjct 24285 AATTCGATCCCTGCTGGGCTTCTGTACAAGATGTTTGAACATTAAACAAGCAAAATCGCA 24226 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||| || ||||| | | ||||||||||| ||||| |||| || ||||| | || Sbjct 24225 ATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAATGCC 24166 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 | ||||| | ||| || || | || || ||| ||||| || |||||||| | Sbjct 24165 CCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAGAAGATTCCCTCGACTGC 24106 Query 17098 TGCAAACGCGATTAATCGTTC 17118 ||||| || |||| || ||| Sbjct 24105 AGCAAAAGCAATTATTCTTTC 24085 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || ||||| | | ||||||||||| ||||| | || || ||||| || || Sbjct 23912 ATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGCAATTTGG 23853 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| || | || ||||||| ||||| || ||| | ||| || ||| | ||| Sbjct 23852 AAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTCCACGAGA 23793 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || || || |||||| || ||||| || || Sbjct 23792 TTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGC 23755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517450533342600