Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq170 111 2e-19 seq408 82.4 8e-11 >seq170 Length=322284 Score = 111 bits (122), Expect = 2e-19 Identities = 221/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 16037 TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACC 16096 ||||| || || || || || || ||||| || ||| || || || ||||| ||| Sbjct 24404 TCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTCATCCCAATAAGATTTACA 24345 Query 16097 GGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTG 16156 || || || | || |||||||| ||||| || || || ||| || || ||| | Sbjct 24344 GGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCCTCTGAGATTATCTCGATA 24285 Query 16157 GCTCGTGTTTCAGACGGTGTATGGTTTAGG-TGTTTAAACATTAGACACGCGAAGTCGCA 16215 ||| | | | || | || | | ||||| ||||||| ||| || || ||||| Sbjct 24284 ATTCGA-TCCCTGCTGGGCTTCTGTACAAGATGTTTGAACATTAAACAAGCAAAATCGCA 24226 Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275 ||||| |||||||| | | |||||||||||||||||||| | || ||||| | || Sbjct 24225 ATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAATGCC 24166 Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333 | ||||| | |||||| || | ||||| || | | | ||||| || ||||| || Sbjct 24165 CCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTG--AAGAAGATTCCCTCGACT 24108 Query 16334 GATGCAAAAGCGATTAATCGTTC 16356 | |||||||| |||| || ||| Sbjct 24107 GCAGCAAAAGCAATTATTCTTTC 24085 >seq408 Length=31413 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATACAG 119073 || |||||||| || |||||| ||| || || |||||||||||| | || ||| | Sbjct 25445 CCTACGTATCCATTTGGATCTTGTCCATCCAAACTGTACTTATCGTTGAGATAAATA--G 25502 Query 119074 ACGCTT--AACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACA 119131 | || || || ||| |||| | | ||||||| || |||||||| |||||||||| Sbjct 25503 AATATTCCAATGCTTGTTCTGGAGATTCAGTCCATTCGAGAATTTTTTTGGCCCAGTACA 25562 Query 119132 TACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATA 119191 | | ||| | || |||||||| || || || | | ||| | || || | ||||| | Sbjct 25563 TCCTCAAAAAGCCATGCATTTTCCCTTCTTTGACAAGCTGGATCTGGGCAGAATTCCAGA 25622 Query 119192 GAGGATCGTGTGT 119204 || ||||| || Sbjct 25623 GATCGTCGTGAGT 25635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511320459567400