Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq3563 131 1e-25 seq3509 125 6e-24 >seq3563 Length=1406 Score = 131 bits (144), Expect = 1e-25 Identities = 316/476 (66%), Gaps = 2/476 (0%) Strand=Plus/Plus Query 18874 GAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAA 18933 ||||||||||||| || | || || |||||||| ||||| | ||| |||| Sbjct 1 GAATCGATCAGCTCCAGGGGTTGATTGAGCGCATTAAAACGAACCCTAACGACCGCCGAA 60 Query 18934 TGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACA 18993 | || || | | ||||| ||| || ||||| |||| || || || || ||| Sbjct 61 TCATCATGACCGCCTGGAACCCAGTCGACATCCCTCAGATGGCTCTTCCGCCTTGCCACT 120 Query 18994 CGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGG 19053 | ||||| || ||||||||||| || |||| ||||| | || ||||| || | Sbjct 121 GCCTCGTCCAGTTCTATGTTGCAAACGGAGAGCTATCGTGCCAGCTCTATCAGAGGTCTG 180 Query 19054 GGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAG 19113 || ||||| || ||||| || || ||||| || | || || |||||||| ||||| | Sbjct 181 CCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTTCTTACTTACATGG 240 Query 19114 TAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATACAATGGGGGATGCACAT 19172 | || || || ||||| ||| || || |||||||| | ||||| | || ||||| ||| Sbjct 241 TTGCTCACGTCACAGG-CTTGAAGCCTGGAGATTTTGTCCATACCTTTGGAGATGCTCAT 299 Query 19173 ATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTT 19232 | || ||||||| || || | || ||| |||||| || || | |||||| Sbjct 300 GTATATCTGAATCACATTGAACCGTTGCAAGAGCAGCTTAAAAGAGTTCCGAGGCCTTTT 359 Query 19233 CCTTGCCTTAAAATTATTCGAAATGTAACAGATATAAACGACTTTAAATGGGACGATTTT 19292 || || | |||| | || || ||||| | ||||| | | |||| || Sbjct 360 CCGAAACTGATCATTAAAAGGAAGGTGGAGAATATAGAGGACTTCACTTTTAACGACTTC 419 Query 19293 CAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCTCTTTAATG 19348 || | | || |||||||| ||||| | | |||||||||||| | ||||| Sbjct 420 GAGATCCAGGGCTATAATCCTTACCCCAAGATCGACATGGAAATGGCTGTCTAATG 475 >seq3509 Length=1415 Score = 125 bits (138), Expect = 6e-24 Identities = 235/342 (69%), Gaps = 10/342 (3%) Strand=Plus/Minus Query 18874 GAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAA 18933 ||||||||||||| || | || || |||||||| ||||| | ||| |||| Sbjct 1415 GAATCGATCAGCTCCAGGGGTTGATTGAGCGCATTAAAACGAACCCTAACGACCGCCGAA 1356 Query 18934 TGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCA-- 18991 | || || | | ||||| ||| || ||||| |||| || || || || || Sbjct 1355 TCATCATGACCGCCTGGAACCCAGTCGACATCCCTCAGATGGCTCTTCCGCCTTGCCATT 1296 Query 18992 --CACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGA 19049 | ||| ||||| || ||||||||||| || |||| ||||| | || ||||| Sbjct 1295 GCCTCGTC----CAGTTCTATGTTGCAAACGGAGAGCTATCGTGCCAGCTCTATCAGAGG 1240 Query 19050 TCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTAC 19109 || | || ||||| || ||||| || || ||||| || | || || |||||||| ||| Sbjct 1239 TCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTTCTTACTTAC 1180 Query 19110 ATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATACAATGGGGGATGC 19168 || || || || || ||||| ||| || || |||||||| | ||||| | || ||||| Sbjct 1179 ATGGTTGCTCACGTCACAGG-CTTGAAGCCTGGAGATTTTGTCCATACCTTTGGAGATGC 1121 Query 19169 ACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCT 19210 ||| | || ||||||| || || | || ||| |||||| Sbjct 1120 TCATGTATATCTGAATCACATTGAACCGTTGCAAGAGCAGCT 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399432450706275