Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3563 109 4e-19 seq3509 109 4e-19 >seq3563 Length=1406 Score = 109 bits (120), Expect = 4e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 101687 TCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC-AC 101745 |||||||||| | ||| | ||||||||||| | ||||||| ||| ||||||||| | Sbjct 319 TCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTC 260 Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805 || | ||||| ||||||| |||| |||| | ||| | ||||| || |||||||| || Sbjct 259 AAGCCT-GTGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGG 201 Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC 101859 || || | ||||| || || || || ||||| || || || || |||| ||| Sbjct 200 GACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCC 147 >seq3509 Length=1415 Score = 109 bits (120), Expect = 4e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 101687 TCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC-AC 101745 |||||||||| | ||| | ||||||||||| | ||||||| ||| ||||||||| | Sbjct 1097 TCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTC 1156 Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805 || | ||||| ||||||| |||| |||| | ||| | ||||| || |||||||| || Sbjct 1157 AAGCCT-GTGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGG 1215 Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC 101859 || || | ||||| || || || || ||||| || || || || |||| ||| Sbjct 1216 GACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCC 1269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361186501603445