Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq13 455 4e-123 seq170 122 1e-22 >seq13 Length=2077869 Score = 455 bits (504), Expect = 4e-123 Identities = 1230/1873 (66%), Gaps = 34/1873 (2%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACCCGTCTTCAGG 1821337 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || || |||| || ||||| || || | ||||| |||| | || ||||| | Sbjct 1821336 CCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAACG 1821277 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||| | |||||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821276 TGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT- 1821218 Query 52988 ATCGTCTTTTGT--GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || |||| | ||||||||||| || ||||| | | ||||| || || | Sbjct 1821217 -TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGGA 1821159 Query 53046 GGTT---TGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102 || | | | ||||| || || | || | ||||| ||||| || || || | Sbjct 1821158 TCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCGT 1821099 Query 53103 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 53162 ||| | | |||||||| | | ||||| | || || ||| |||||| | Sbjct 1821098 CCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCAC 1821039 Query 53163 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 53222 | || | || | ||| |||||| || ||| || || || | |||||||| || | Sbjct 1821038 CCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGC 1820979 Query 53223 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 53282 | | |||||| | ||| ||||| || ||||| || |||| || || ||| |||| | Sbjct 1820978 CAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACGC 1820919 Query 53283 CGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 53341 | || || | | ||||| || || || |||| | ||| | || | || Sbjct 1820918 CATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTG 1820860 Query 53342 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 53401 || || || || || ||| | |||||| | || || ||||| Sbjct 1820859 TCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTAC 1820800 Query 53402 GGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 53458 ||||| ||| || ||||||||| || || || || | || ||||| ||||| ||| Sbjct 1820799 GGTCCAAATTCTTT---AGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTT 1820743 Query 53459 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 53518 || || |||| || ||| | | ||| || ||| ||| || | || ||| | ||| Sbjct 1820742 TCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGA 1820683 Query 53519 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 53578 || || | || || | ||||| ||||| || || || || | || || | || || Sbjct 1820682 ATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGAC 1820623 Query 53579 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACA 53638 | | ||||||||| || ||||| || |||||||| ||||| || || || || || Sbjct 1820622 TTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTC 1820563 Query 53639 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCATCTATTACAAA 53694 | | ||| || |||||| ||| | || ||| | || ||| | | || || Sbjct 1820562 ACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCG-TGACGAA 1820504 Query 53695 CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 53754 ||||||||| |||||||| |||| |||||| ||||||| || | || ||| || | Sbjct 1820503 CATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTC 1820444 Query 53755 TATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 53814 || || || ||||| ||||| ||||| || || || || | ||| || || |||||||| Sbjct 1820443 TACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTT 1820384 Query 53815 TTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTAT 53874 | |||| || || ||||| || | || | || || || || || | ||| ||||| || Sbjct 1820383 TCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAAT 1820324 Query 53875 AATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA 53934 || || ||| | | ||||| | | ||| | | || | ||||| Sbjct 1820323 TATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTA 1820264 Query 53935 TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 53994 | ||| || | ||| || | || ||||| || | | ||||||||| || Sbjct 1820263 TTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATT 1820204 Query 53995 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 54054 ||||||||||| ||||| ||| | || ||| || | |||||||||||||| ||||| Sbjct 1820203 TGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAAT 1820144 Query 54055 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 ||| || || ||||| || | | | || || || || || ||||| || || Sbjct 1820143 CCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTCTTCTTCAG 1820084 Query 54115 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGG 54174 | || ||| | | | ||| | |||||| || |||||||| || | | | || || Sbjct 1820083 GTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGG 1820024 Query 54175 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 ||||| ||||||||||| || | || | || ||| ||| | || |||||||| || Sbjct 1820023 ACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGG 1819964 Query 54235 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC--TTCCACTGGCACGAATA 54292 || | |||||| ||| ||||| || || || |||||| |||| | || || ||| Sbjct 1819963 AACGAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTTCGCTCGGATA 1819906 Query 54293 TTACTAATTGA----TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 54348 ||| || || || || || ||||| | || ||||| | ||||| || | Sbjct 1819905 C----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCAGCGCTC 1819850 Query 54349 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 54408 | | | |||| ||||| || ||| || | |||| | | ||||||||| || Sbjct 1819849 CACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACACGAGGA 1819790 Query 54409 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 54468 | ||| |||||| || | || || || || || || || || || || |||| Sbjct 1819789 GAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAAATATTT 1819730 Query 54469 TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTA 54527 ||| ||||| || |||||||| ||||| || | || ||||| || | |||||||| | Sbjct 1819729 TTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAATTCCGA 1819671 Query 54528 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCA 54587 ||| || | ||| |||||||||||||||| ||| |||| || || ||||| | | Sbjct 1819670 CTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTTTTAAAA 1819611 Query 54588 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 54647 ||||| |||| | ||||||||| || || |||||||| ||||| || ||||||| Sbjct 1819610 GATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGTCGTAAA 1819551 Query 54648 TAATAACTGAGTT 54660 |||| ||||||| Sbjct 1819550 TAATTGCTGAGTT 1819538 >seq170 Length=322284 Score = 122 bits (134), Expect = 1e-22 Identities = 185/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 24119 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 24178 |||||| ||||| ||||| || |||||||| |||| || ||||| | || | ||| Sbjct 24255 ATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTC 24196 Query 24179 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 24238 ||||||||| || || || ||||| | ||| | ||| || ||||| || || || ||||| Sbjct 24195 GTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAA 24136 Query 24239 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC 24298 ||| ||||| ||||| || ||||| ||||| ||||| | |||||| || || Sbjct 24135 ACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATT 24076 Query 24299 GGC--GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355 || || | || |||||| ||||| || ||||||||||| ||||| || | Sbjct 24075 AGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAA 24016 Query 24356 TGTCTCTATAGCATTAAAGAG 24376 || || || || || ||||| Sbjct 24015 GGTTTCAATTGCGTTGAAGAG 23995 Score = 113 bits (124), Expect = 5e-20 Identities = 188/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 ||| |||| ||| || || || |||| ||| ||||||||||| || | ||||| ||||| Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || ||||||||| | | ||| || | || || || || | || || || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 24515 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 24574 | | ||||||||| || |||||||| ||| || || || || | || ||| || Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 24575 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 24634 || | || || | | || |||||| | ||||| | | || || || | | || Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 24635 TTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 ||| |||||||||||||| || || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593612540763600