Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3563 161 1e-34 seq3509 152 6e-32 >seq3563 Length=1406 Score = 161 bits (178), Expect = 1e-34 Identities = 284/414 (69%), Gaps = 0/414 (0%) Strand=Plus/Minus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 ||||||| ||||| |||||| ||| | || || | ||||||| | | | |||| Sbjct 474 ATTAGACAGCCATTTCCATGTCGATCTTGGGGTAAGGATTATAGCCCTGGATCTCGAAGT 415 Query 145595 CCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGG 145654 | | ||||||| ||||| | ||||||| ||| || | || | ||||| | Sbjct 414 CGTTAAAAGTGAAGTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAG 355 Query 145655 GCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 ||| || || | ||||| | || || || | ||| || || || || || | Sbjct 354 GCCTCGGAACTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTCAGATATACATGAG 295 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 | || || | | |||| || || || |||| | ||| |||| ||| || ||||||| Sbjct 294 CATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACCATGT 235 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 | || || |||| ||||||||| ||||| || || |||||||| |||||||| | || | Sbjct 234 AAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACC 175 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894 ||| || |||||||| || ||||| ||| || || ||||||||| ||| ||||| Sbjct 174 TCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAGTGGC 115 Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 | ||||| || ||||| || | ||| | |||||||||||||| | || || Sbjct 114 AAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGGTTCCAGGCGGTCATGATGA 61 >seq3509 Length=1415 Score = 152 bits (168), Expect = 6e-32 Identities = 282/414 (68%), Gaps = 0/414 (0%) Strand=Plus/Plus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 ||||||| ||||| |||||| ||| | || || | ||||||| | | | |||| Sbjct 942 ATTAGACAGCCATTTCCATGTCGATCTTGGGGTAAGGATTATAGCCCTGGATCTCGAAGT 1001 Query 145595 CCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGG 145654 | | |||| || ||||| | ||||||| ||| || | || | ||||| | Sbjct 1002 CGTTAAAAGTGAACTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAG 1061 Query 145655 GCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 ||| || || | ||||| | || || || | ||| || || || || || | Sbjct 1062 GCCTCGGAACTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTCAGATATACATGAG 1121 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 | || || | | |||| || || || |||| | ||| |||| ||| || ||||||| Sbjct 1122 CATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACCATGT 1181 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 | || || |||| ||||||||| ||||| || || |||||||| |||||||| | || | Sbjct 1182 AAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACC 1241 Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894 ||| || |||||||| || ||||| ||| || || ||||||||| ||| |||| Sbjct 1242 TCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAATGGC 1301 Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 | ||||| || ||||| || | ||| | |||||||||||||| | || || Sbjct 1302 AAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGGTTCCAGGCGGTCATGATGA 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589968410267800